Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
TOPBP1Q92547 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
TOPBP1Q92547 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
TOPBP1Q92547 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
TOPBP1Q92547 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.9□□□□□ -0.82
TOPBP1Q92547 AC019185.1-201ENST00000442718 389 ntBASIC9.9□□□□□ -0.82
TOPBP1Q92547 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 AL021368.3-201ENST00000607119 578 ntBASIC9.9□□□□□ -0.82
TOPBP1Q92547 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
TOPBP1Q92547 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
TOPBP1Q92547 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.9□□□□□ -0.82
TOPBP1Q92547 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
TOPBP1Q92547 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
TOPBP1Q92547 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
TOPBP1Q92547 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
TOPBP1Q92547 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC9.9□□□□□ -0.83
TOPBP1Q92547 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 GTF2IP4-201ENST00000453092 2054 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AL589647.1-201ENST00000402485 466 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 SLC35E1P1-201ENST00000419313 864 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 VN1R54P-201ENST00000435210 1049 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC072052.1-201ENST00000496556 306 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 AP000676.2-201ENST00000529711 301 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 GARSP1-201ENST00000570895 719 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 TAS2R6P-201ENST00000605022 826 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 AL445647.2-201ENST00000615170 130 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC096921.2-201ENST00000561507 1916 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 AC008937.3-201ENST00000606813 1700 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 MROH3P-201ENST00000435735 2676 ntBASIC9.89□□□□□ -0.83
TOPBP1Q92547 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
TOPBP1Q92547 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
TOPBP1Q92547 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 CAV1-204ENST00000393470 598 ntTSL 4 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 SCARNA6.1-201ENST00000516989 238 ntBASIC9.88□□□□□ -0.83
TOPBP1Q92547 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 ELOCP28-201ENST00000590044 317 ntBASIC9.88□□□□□ -0.83
TOPBP1Q92547 AC119674.1-217ENST00000641942 1086 ntBASIC9.88□□□□□ -0.83
TOPBP1Q92547 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
TOPBP1Q92547 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 AC110597.1-201ENST00000562669 3176 ntBASIC9.88□□□□□ -0.83
TOPBP1Q92547 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
TOPBP1Q92547 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC9.87□□□□□ -0.83
TOPBP1Q92547 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms