Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.394-201ENST00000383942 103 ntBASIC8.08□□□□□ -1.12
VARSP26640 RNU6-31P-201ENST00000384388 108 ntBASIC8.08□□□□□ -1.12
VARSP26640 MIR614-201ENST00000385082 90 ntBASIC8.08□□□□□ -1.12
VARSP26640 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 CYCSP45-201ENST00000402289 315 ntBASIC8.08□□□□□ -1.12
VARSP26640 MORF4L1P1-201ENST00000404582 967 ntBASIC8.08□□□□□ -1.12
VARSP26640 MIR1269A-201ENST00000408636 105 ntBASIC8.08□□□□□ -1.12
VARSP26640 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC066692.1-201ENST00000421721 457 ntBASIC8.08□□□□□ -1.12
VARSP26640 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 RPL31P54-201ENST00000429803 370 ntBASIC8.08□□□□□ -1.12
VARSP26640 FECHP1-201ENST00000431896 1214 ntBASIC8.08□□□□□ -1.12
VARSP26640 AL035417.1-201ENST00000442754 214 ntBASIC8.08□□□□□ -1.12
VARSP26640 AL451081.2-201ENST00000448115 933 ntBASIC8.08□□□□□ -1.12
VARSP26640 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 PDSS1P2-201ENST00000449397 678 ntBASIC8.08□□□□□ -1.12
VARSP26640 SNORD42A-201ENST00000459584 64 ntBASIC8.08□□□□□ -1.12
VARSP26640 RPS20P4-201ENST00000461659 355 ntBASIC8.08□□□□□ -1.12
VARSP26640 RN7SL63P-201ENST00000468228 304 ntBASIC8.08□□□□□ -1.12
VARSP26640 RN7SL621P-201ENST00000472565 299 ntBASIC8.08□□□□□ -1.12
VARSP26640 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 IGBP1P4-201ENST00000503202 879 ntBASIC8.08□□□□□ -1.12
VARSP26640 AC019235.1-201ENST00000503847 207 ntBASIC8.08□□□□□ -1.12
VARSP26640 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 AC009646.1-201ENST00000510455 318 ntBASIC8.08□□□□□ -1.12
VARSP26640 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.08□□□□□ -1.12
VARSP26640 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 AF235103.2-201ENST00000525753 346 ntBASIC8.08□□□□□ -1.12
VARSP26640 OR4A12P-201ENST00000530847 918 ntBASIC8.08□□□□□ -1.12
VARSP26640 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC8.08□□□□□ -1.12
VARSP26640 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 PLEKHA3P1-201ENST00000598554 894 ntBASIC8.08□□□□□ -1.12
VARSP26640 AC233280.2-201ENST00000603917 1070 ntBASIC8.08□□□□□ -1.12
VARSP26640 AL358335.3-201ENST00000604678 327 ntBASIC8.08□□□□□ -1.12
VARSP26640 AC106900.2-201ENST00000604994 317 ntBASIC8.08□□□□□ -1.12
VARSP26640 AC009686.2-201ENST00000607017 577 ntBASIC8.08□□□□□ -1.12
VARSP26640 AL590282.1-201ENST00000610379 1136 ntBASIC8.08□□□□□ -1.12
VARSP26640 RBM22P6-201ENST00000611682 867 ntBASIC8.08□□□□□ -1.12
VARSP26640 RMST_5.1-201ENST00000618704 126 ntBASIC8.08□□□□□ -1.12
VARSP26640 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.08□□□□□ -1.12
VARSP26640 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
VARSP26640 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC073488.11-201ENST00000633298 754 ntBASIC8.08□□□□□ -1.12
VARSP26640 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 AL359396.1-201ENST00000623151 2376 ntBASIC8.08□□□□□ -1.12
VARSP26640 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 IFIT1P1-201ENST00000400497 1449 ntBASIC8.08□□□□□ -1.12
VARSP26640 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 AC135352.1-201ENST00000506173 1418 ntBASIC8.08□□□□□ -1.12
VARSP26640 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 MAK-202ENST00000354489 3941 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 TTC3P1-201ENST00000399586 6081 ntBASIC8.08□□□□□ -1.12
VARSP26640 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.08□□□□□ -1.12
VARSP26640 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.08□□□□□ -1.12
VARSP26640 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 AL136981.1-203ENST00000451452 3844 ntBASIC8.08□□□□□ -1.12
VARSP26640 HSPD1P7-201ENST00000447985 1686 ntBASIC8.08□□□□□ -1.12
VARSP26640 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
VARSP26640 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC8.07□□□□□ -1.12
VARSP26640 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 FRG1BP-201ENST00000278882 761 ntBASIC8.07□□□□□ -1.12
VARSP26640 FRG1CP-201ENST00000358464 769 ntBASIC8.07□□□□□ -1.12
VARSP26640 RNU6-501P-201ENST00000364072 100 ntBASIC8.07□□□□□ -1.12
VARSP26640 Y_RNA.311-201ENST00000365068 96 ntBASIC8.07□□□□□ -1.12
VARSP26640 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.07□□□□□ -1.12
VARSP26640 RNU6-297P-201ENST00000384636 107 ntBASIC8.07□□□□□ -1.12
VARSP26640 SNORA35-201ENST00000386104 128 ntBASIC8.07□□□□□ -1.12
VARSP26640 AL121977.1-201ENST00000401636 979 ntBASIC8.07□□□□□ -1.12
VARSP26640 MIR1272-201ENST00000408106 129 ntBASIC8.07□□□□□ -1.12
VARSP26640 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VARSP26640 RN7SKP85-201ENST00000411349 318 ntBASIC8.07□□□□□ -1.12
VARSP26640 HMGB3P31-201ENST00000413333 595 ntBASIC8.07□□□□□ -1.12
VARSP26640 RANP6-201ENST00000413691 644 ntBASIC8.07□□□□□ -1.12
VARSP26640 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms