Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GAPDHP69-201ENST00000425504 1008 ntBASIC6.17□□□□□ -1.42
CD40P25942 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 PUDPP2-201ENST00000431423 643 ntBASIC6.17□□□□□ -1.42
CD40P25942 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 AC027124.1-201ENST00000440852 466 ntBASIC6.17□□□□□ -1.42
CD40P25942 BX005266.3-201ENST00000443013 1075 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 RPL34P26-201ENST00000445636 354 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC009244.1-201ENST00000450566 258 ntBASIC6.17□□□□□ -1.42
CD40P25942 AL133217.1-201ENST00000450980 425 ntBASIC6.17□□□□□ -1.42
CD40P25942 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 AGKP1-201ENST00000455254 1263 ntBASIC6.17□□□□□ -1.42
CD40P25942 MED28P7-201ENST00000456611 530 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC019084.1-201ENST00000457337 432 ntBASIC6.17□□□□□ -1.42
CD40P25942 GAPDHP53-201ENST00000458397 924 ntBASIC6.17□□□□□ -1.42
CD40P25942 SNORA81.1-201ENST00000458922 177 ntBASIC6.17□□□□□ -1.42
CD40P25942 RNU7-140P-201ENST00000459546 60 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC079193.1-201ENST00000460497 588 ntBASIC6.17□□□□□ -1.42
CD40P25942 RN7SL797P-201ENST00000486314 297 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC066616.1-201ENST00000486795 413 ntBASIC6.17□□□□□ -1.42
CD40P25942 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.17□□□□□ -1.42
CD40P25942 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 AC131392.1-201ENST00000506490 633 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC138866.2-201ENST00000508650 584 ntBASIC6.17□□□□□ -1.42
CD40P25942 GUSBP9-201ENST00000510138 584 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC109464.1-201ENST00000511091 819 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 AC027801.3-201ENST00000515049 698 ntBASIC6.17□□□□□ -1.42
CD40P25942 RN7SKP233-201ENST00000517005 110 ntBASIC6.17□□□□□ -1.42
CD40P25942 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.17□□□□□ -1.42
CD40P25942 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 MTND2P26-201ENST00000528255 1029 ntBASIC6.17□□□□□ -1.42
CD40P25942 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.17□□□□□ -1.42
CD40P25942 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.17□□□□□ -1.42
CD40P25942 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 ATP5F1P7-201ENST00000567330 760 ntBASIC6.17□□□□□ -1.42
CD40P25942 MIR5682-201ENST00000584864 76 ntBASIC6.17□□□□□ -1.42
CD40P25942 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 AC012065.3-201ENST00000602736 439 ntBASIC6.17□□□□□ -1.42
CD40P25942 AL360219.1-201ENST00000610230 366 ntBASIC6.17□□□□□ -1.42
CD40P25942 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 AL161420.1-201ENST00000619393 264 ntBASIC6.17□□□□□ -1.42
CD40P25942 AC005753.1-201ENST00000623837 618 ntBASIC6.17□□□□□ -1.42
CD40P25942 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.17□□□□□ -1.42
CD40P25942 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 ZNF733P-202ENST00000444809 1573 ntBASIC6.17□□□□□ -1.42
CD40P25942 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CD40P25942 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CD40P25942 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CD40P25942 CASC19-205ENST00000641013 1411 ntBASIC6.16□□□□□ -1.42
CD40P25942 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CD40P25942 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.16□□□□□ -1.42
CD40P25942 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 RNU6-353P-201ENST00000364266 108 ntBASIC6.16□□□□□ -1.42
CD40P25942 SNORD116-1-201ENST00000384335 95 ntBASIC6.16□□□□□ -1.42
CD40P25942 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CD40P25942 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 AL590084.1-201ENST00000407885 387 ntBASIC6.16□□□□□ -1.42
CD40P25942 RN7SKP254-201ENST00000410685 310 ntBASIC6.16□□□□□ -1.42
CD40P25942 VTA1P1-201ENST00000414044 866 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 SNRPEP5-201ENST00000425442 278 ntBASIC6.16□□□□□ -1.42
CD40P25942 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CD40P25942 RPSAP32-201ENST00000432681 526 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC114402.2-201ENST00000432760 643 ntBASIC6.16□□□□□ -1.42
CD40P25942 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.16□□□□□ -1.42
CD40P25942 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.16□□□□□ -1.42
CD40P25942 GLRXP3-201ENST00000470810 321 ntBASIC6.16□□□□□ -1.42
CD40P25942 RN7SL88P-201ENST00000480166 299 ntBASIC6.16□□□□□ -1.42
CD40P25942 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms