Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RN7SL72P-201ENST00000460697 269 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AC026348.1-201ENST00000462549 1053 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 RPL32P33-201ENST00000487023 394 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AL445670.1-201ENST00000618889 801 ntBASIC7.68□□□□□ -1.18
SCN11AQ9UI33 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCN11AQ9UI33 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 RNA5SP375-201ENST00000362975 119 ntBASIC7.67□□□□□ -1.18
SCN11AQ9UI33 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 HMGB3P24-201ENST00000433260 622 ntBASIC7.67□□□□□ -1.18
SCN11AQ9UI33 RPS17P15-201ENST00000475609 349 ntBASIC7.67□□□□□ -1.18
SCN11AQ9UI33 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 AC016769.4-201ENST00000616893 535 ntBASIC7.67□□□□□ -1.18
SCN11AQ9UI33 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCN11AQ9UI33 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 DPPA2P3-201ENST00000411853 655 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 MYL6P5-201ENST00000412707 459 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 OR6E1P-201ENST00000414424 923 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC073610.1-201ENST00000489971 396 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC008937.3-201ENST00000606813 1700 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL162739.1-201ENST00000450606 307 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL589674.2-201ENST00000604304 337 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AL049840.6-201ENST00000604583 345 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC004890.3-201ENST00000605566 1095 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.66□□□□□ -1.18
SCN11AQ9UI33 AC087565.3-203ENST00000641018 837 ntBASIC7.66□□□□□ -1.18
SCN11AQ9UI33 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms