Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RPL7P11-201ENST00000437586 658 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC010240.2-201ENST00000445363 1205 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC069213.3-201ENST00000454858 474 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC234771.3-201ENST00000454984 622 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 ARPC3P2-201ENST00000457786 533 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC079193.1-201ENST00000460497 588 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 Y_RNA.718-201ENST00000517110 102 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC104986.1-201ENST00000517978 436 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC024224.1-201ENST00000538284 609 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC068714.1-201ENST00000559623 800 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AP001542.2-201ENST00000593141 364 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 EXOSC3P2-201ENST00000594464 497 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 MTCO2P22-201ENST00000603246 681 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC084781.2-201ENST00000615568 161 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC073107.2-201ENST00000620476 238 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC067931.1-201ENST00000624190 671 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AC136428.3-201ENST00000566387 1990 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 FAM74A4-203ENST00000621724 1862 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 HM13-224ENST00000498035 3932 ntTSL 2 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ANKRD20A11P-206ENST00000451663 3717 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 DCAF13P3-201ENST00000561147 1334 ntBASIC9.04□□□□□ -0.96
VARS2Q5ST30 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VARS2Q5ST30 AP005230.1-205ENST00000639316 2015 ntTSL 5 BASIC9.04□□□□□ -0.96
VARS2Q5ST30 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 EEF1A1P10-201ENST00000475365 1390 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC005294.1-201ENST00000355509 281 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 RN7SKP44-201ENST00000363602 316 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 SNORD116-29-201ENST00000384516 83 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 RNU6-510P-201ENST00000391239 108 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL162578.1-201ENST00000406202 378 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL669831.1-202ENST00000428504 417 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL359711.1-201ENST00000441999 123 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 HMGN1P36-201ENST00000446623 298 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 RN7SL395P-201ENST00000462960 291 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC074386.1-201ENST00000476560 767 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 RPL5P12-201ENST00000477071 851 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 CDV3-208ENST00000511392 554 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 NRBF2P4-201ENST00000520874 850 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 PHBP17-201ENST00000528576 541 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL391646.1-201ENST00000603860 190 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AL355810.1-201ENST00000614629 552 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 FAM157A-202ENST00000615155 405 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 CPEB1-AS1-202ENST00000618020 2994 ntBASIC9.03□□□□□ -0.96
VARS2Q5ST30 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms