Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MORF4L1P4-201ENST00000450245 976 ntBASIC8.46□□□□□ -1.06
PTCH1Q13635 RPS17P15-201ENST00000475609 349 ntBASIC8.46□□□□□ -1.06
PTCH1Q13635 UBA52P7-201ENST00000486088 380 ntBASIC8.46□□□□□ -1.06
PTCH1Q13635 DUTP7-201ENST00000507982 486 ntBASIC8.46□□□□□ -1.06
PTCH1Q13635 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC8.46□□□□□ -1.06
PTCH1Q13635 AC024940.4-201ENST00000605507 246 ntBASIC8.46□□□□□ -1.06
PTCH1Q13635 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.46□□□□□ -1.06
PTCH1Q13635 AC024587.1-201ENST00000505925 2157 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 FO082842.1-201ENST00000423552 1370 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.45□□□□□ -1.06
PTCH1Q13635 BIN2P1-201ENST00000504996 1530 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PTCH1Q13635 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
PTCH1Q13635 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
PTCH1Q13635 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 AC110597.1-201ENST00000562669 3176 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PTCH1Q13635 RN7SKP77-201ENST00000363261 353 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 RNA5SP394-201ENST00000364216 119 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.45□□□□□ -1.06
PTCH1Q13635 NMD3P2-201ENST00000421815 761 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 AC108693.1-201ENST00000496068 432 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.45□□□□□ -1.06
PTCH1Q13635 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.45□□□□□ -1.06
PTCH1Q13635 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.45□□□□□ -1.06
PTCH1Q13635 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.45□□□□□ -1.06
PTCH1Q13635 FO393422.1-201ENST00000603908 708 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 AL691477.1-201ENST00000624398 162 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 SAMMSON-227ENST00000642114 1199 ntBASIC8.45□□□□□ -1.06
PTCH1Q13635 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTCH1Q13635 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AC127024.8-201ENST00000623719 2094 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.44□□□□□ -1.06
PTCH1Q13635 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 AL359976.1-201ENST00000418655 3528 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 TANK-205ENST00000405852 2155 ntTSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTCH1Q13635 RNA5SP350-201ENST00000363298 111 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 RN7SKP128-201ENST00000364270 303 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
PTCH1Q13635 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AL445928.1-201ENST00000435545 222 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 AC011742.2-201ENST00000443818 352 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 AC068522.1-201ENST00000482895 345 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.44□□□□□ -1.06
PTCH1Q13635 AC073916.1-201ENST00000545095 130 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 OR7A1P-201ENST00000601206 970 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 AC097467.4-201ENST00000605504 141 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 AL445649.1-201ENST00000615941 691 ntBASIC8.44□□□□□ -1.06
PTCH1Q13635 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.44□□□□□ -1.06
PTCH1Q13635 TEK-202ENST00000406359 3935 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.43□□□□□ -1.06
PTCH1Q13635 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTCH1Q13635 HDAC1P2-201ENST00000453661 1398 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 AC117409.1-201ENST00000470499 1310 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 MIR433-201ENST00000384837 93 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.43□□□□□ -1.06
PTCH1Q13635 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.43□□□□□ -1.06
PTCH1Q13635 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms