Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 AL049872.1-201ENST00000556323 322 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 AL157831.2-201ENST00000564681 3095 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 INTS6P1-201ENST00000504674 2530 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 SLC25A25-AS1-201ENST00000418747 6391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 RN7SKP6-201ENST00000364795 319 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AL049693.1-201ENST00000402760 611 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 MIR1204-201ENST00000408388 67 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 AC026826.1-201ENST00000493002 361 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 AC091965.3-201ENST00000506236 208 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 RBM22P12-201ENST00000567098 1255 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 PFKM-232ENST00000629846 381 ntTSL 4 BASIC4.14□□□□□ -1.75
PRKDCP78527 AC135068.12-201ENST00000637370 931 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 OR55B1P-203ENST00000641518 2602 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 ACAN-208ENST00000561243 7593 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AC105749.1-201ENST00000631338 2008 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 RPS4XP9-201ENST00000405151 780 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 OR6D1P-201ENST00000436165 939 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 RN7SL165P-201ENST00000477476 291 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 SAMMSON-209ENST00000641222 1100 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 Z98755.1-201ENST00000407015 1384 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRKDCP78527 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 AC119674.1-204ENST00000641348 1343 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AL034549.2-201ENST00000618285 3373 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 AC087672.1-201ENST00000479876 766 ntBASIC4.14□□□□□ -1.75
PRKDCP78527 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.14□□□□□ -1.75
PRKDCP78527 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
PRKDCP78527 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.14□□□□□ -1.75
PRKDCP78527 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
PRKDCP78527 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PRKDCP78527 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
PRKDCP78527 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 AL359091.1-201ENST00000449048 1734 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.13□□□□□ -1.75
PRKDCP78527 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKDCP78527 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKDCP78527 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 OR10R3P-201ENST00000361688 942 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms