Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CDH13P55290 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CDH13P55290 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CDH13P55290 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 DNM1P47-203ENST00000571780 12667 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH13P55290 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH13P55290 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
CDH13P55290 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 RNU1-59P-201ENST00000364829 162 ntBASIC6.07□□□□□ -1.44
CDH13P55290 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH13P55290 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CDH13P55290 MIR1266-201ENST00000408125 84 ntBASIC6.07□□□□□ -1.44
CDH13P55290 RN7SKP38-201ENST00000410782 309 ntBASIC6.07□□□□□ -1.44
CDH13P55290 UBTFL2-201ENST00000411859 1191 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CDH13P55290 AL645939.3-201ENST00000435408 225 ntBASIC6.07□□□□□ -1.44
CDH13P55290 MORF4-201ENST00000447135 971 ntBASIC6.07□□□□□ -1.44
CDH13P55290 COX4I1P2-201ENST00000447446 547 ntBASIC6.07□□□□□ -1.44
CDH13P55290 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH13P55290 NPM1P9-201ENST00000453156 844 ntBASIC6.07□□□□□ -1.44
CDH13P55290 RPL31P11-202ENST00000454082 372 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH13P55290 AC002075.1-201ENST00000457396 676 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AL445687.2-201ENST00000458156 728 ntBASIC6.07□□□□□ -1.44
CDH13P55290 RN7SL643P-201ENST00000471845 291 ntBASIC6.07□□□□□ -1.44
CDH13P55290 RN7SL369P-201ENST00000477138 299 ntBASIC6.07□□□□□ -1.44
CDH13P55290 TRBV8-1-201ENST00000481590 279 ntBASIC6.07□□□□□ -1.44
CDH13P55290 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH13P55290 AC114728.1-201ENST00000488289 483 ntBASIC6.07□□□□□ -1.44
CDH13P55290 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 RNA5SP96-201ENST00000516041 107 ntBASIC6.07□□□□□ -1.44
CDH13P55290 IGHV4-55-201ENST00000520889 368 ntBASIC6.07□□□□□ -1.44
CDH13P55290 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 GTF2IP11-201ENST00000526931 420 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 AC084851.2-201ENST00000530377 364 ntBASIC6.07□□□□□ -1.44
CDH13P55290 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH13P55290 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH13P55290 AC036176.3-201ENST00000602456 418 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AC090953.1-201ENST00000604305 1092 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AC018690.1-201ENST00000608144 626 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH13P55290 AC068726.1-201ENST00000610993 341 ntBASIC6.07□□□□□ -1.44
CDH13P55290 U1.25-201ENST00000614085 162 ntBASIC6.07□□□□□ -1.44
CDH13P55290 AC005899.7-201ENST00000618199 588 ntBASIC6.07□□□□□ -1.44
CDH13P55290 U1.34-201ENST00000618578 162 ntBASIC6.07□□□□□ -1.44
CDH13P55290 U1.31-201ENST00000620022 160 ntBASIC6.07□□□□□ -1.44
CDH13P55290 OR7A1P-202ENST00000641542 1158 ntBASIC6.07□□□□□ -1.44
CDH13P55290 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH13P55290 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH13P55290 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AC137056.2-201ENST00000624055 1958 ntBASIC6.06□□□□□ -1.44
CDH13P55290 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 ZNF101P1-201ENST00000435701 1720 ntBASIC6.06□□□□□ -1.44
CDH13P55290 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDH13P55290 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AC003045.1-201ENST00000398779 713 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AL121835.1-201ENST00000404250 354 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AC015977.1-201ENST00000418887 292 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AC244453.4-201ENST00000419150 388 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AL354707.3-201ENST00000427308 331 ntBASIC6.06□□□□□ -1.44
CDH13P55290 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH13P55290 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH13P55290 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH13P55290 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH13P55290 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 298.8 ms