Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.82□□□□□ -1.16
COL15A1P39059 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
COL15A1P39059 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.82□□□□□ -1.16
COL15A1P39059 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
COL15A1P39059 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.82□□□□□ -1.16
COL15A1P39059 AL451136.1-201ENST00000435399 325 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.82□□□□□ -1.16
COL15A1P39059 AL157385.1-201ENST00000446973 268 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 AL445466.1-201ENST00000448432 357 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 GEMIN2P1-201ENST00000454246 752 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 RNU6-775P-201ENST00000459318 96 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 RN7SL629P-201ENST00000489622 285 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.82□□□□□ -1.16
COL15A1P39059 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.82□□□□□ -1.16
COL15A1P39059 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.82□□□□□ -1.16
COL15A1P39059 OR6M2P-201ENST00000529831 871 ntBASIC7.82□□□□□ -1.16
COL15A1P39059 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
COL15A1P39059 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.82□□□□□ -1.16
COL15A1P39059 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 BIN2P1-201ENST00000504996 1530 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
COL15A1P39059 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 AC022819.1-201ENST00000563495 3910 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.81□□□□□ -1.16
COL15A1P39059 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 AC005618.1-201ENST00000606901 3148 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 RPS2P45-201ENST00000469997 2057 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.81□□□□□ -1.16
COL15A1P39059 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.81□□□□□ -1.16
COL15A1P39059 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 RN7SKP161-201ENST00000411110 305 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 UBE2V1P14-201ENST00000415815 558 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AL513325.1-201ENST00000417716 1034 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC092967.1-201ENST00000449016 481 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.81□□□□□ -1.16
COL15A1P39059 AL136038.1-201ENST00000497246 351 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC007225.2-201ENST00000562529 256 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC007066.2-202ENST00000566531 914 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC7.81□□□□□ -1.16
COL15A1P39059 MIR4489-201ENST00000578869 62 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 RPL12P48-201ENST00000605620 304 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC006924.1-201ENST00000610750 559 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 AC106872.5-201ENST00000508856 1416 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AL391261.1-201ENST00000555712 1479 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
COL15A1P39059 AC023632.6-201ENST00000624338 2177 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 AC013268.3-201ENST00000262716 2324 ntBASIC7.81□□□□□ -1.16
COL15A1P39059 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
COL15A1P39059 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 CR788268.1-201ENST00000603931 1809 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.8□□□□□ -1.16
COL15A1P39059 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
COL15A1P39059 RNA5SP500-201ENST00000364486 119 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 RNU11-6P-201ENST00000391127 133 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 RN7SKP278-201ENST00000410504 342 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
COL15A1P39059 AC245884.2-201ENST00000426257 404 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 AL121776.1-201ENST00000429337 372 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.8□□□□□ -1.16
COL15A1P39059 RPS27AP2-201ENST00000457576 465 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.8□□□□□ -1.16
COL15A1P39059 RPSAP37-201ENST00000470913 821 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 AC007688.1-201ENST00000475592 759 ntBASIC7.8□□□□□ -1.16
COL15A1P39059 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms