Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CPS1P31327 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CPS1P31327 GUCY1B2-204ENST00000531898 1979 ntBASIC8.57□□□□□ -1.04
CPS1P31327 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.57□□□□□ -1.04
CPS1P31327 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 METTL15P3-201ENST00000415522 1221 ntBASIC8.56□□□□□ -1.04
CPS1P31327 AC126120.1-201ENST00000431082 470 ntBASIC8.56□□□□□ -1.04
CPS1P31327 DNAJB5P1-201ENST00000454004 806 ntBASIC8.56□□□□□ -1.04
CPS1P31327 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.56□□□□□ -1.04
CPS1P31327 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.56□□□□□ -1.04
CPS1P31327 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.56□□□□□ -1.04
CPS1P31327 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.56□□□□□ -1.04
CPS1P31327 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.56□□□□□ -1.04
CPS1P31327 OR6M2P-201ENST00000529831 871 ntBASIC8.56□□□□□ -1.04
CPS1P31327 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC8.56□□□□□ -1.04
CPS1P31327 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC8.56□□□□□ -1.04
CPS1P31327 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
CPS1P31327 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CPS1P31327 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 AC104581.5-201ENST00000624171 7141 ntBASIC8.55□□□□□ -1.04
CPS1P31327 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 AL589647.1-201ENST00000402485 466 ntBASIC8.55□□□□□ -1.04
CPS1P31327 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC8.55□□□□□ -1.04
CPS1P31327 AL390119.1-201ENST00000440329 312 ntBASIC8.55□□□□□ -1.04
CPS1P31327 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.55□□□□□ -1.04
CPS1P31327 AC092967.1-201ENST00000449016 481 ntBASIC8.55□□□□□ -1.04
CPS1P31327 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.55□□□□□ -1.04
CPS1P31327 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.55□□□□□ -1.04
CPS1P31327 AC023245.1-201ENST00000468501 517 ntBASIC8.55□□□□□ -1.04
CPS1P31327 RPL15P21-201ENST00000495592 567 ntBASIC8.55□□□□□ -1.04
CPS1P31327 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.55□□□□□ -1.04
CPS1P31327 SNORA43.3-201ENST00000517240 103 ntBASIC8.55□□□□□ -1.04
CPS1P31327 DPPA2P4-201ENST00000563717 878 ntBASIC8.55□□□□□ -1.04
CPS1P31327 MIR4436B2-201ENST00000581415 91 ntBASIC8.55□□□□□ -1.04
CPS1P31327 MIR4436B1-201ENST00000583272 91 ntBASIC8.55□□□□□ -1.04
CPS1P31327 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.55□□□□□ -1.04
CPS1P31327 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.55□□□□□ -1.04
CPS1P31327 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
CPS1P31327 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.55□□□□□ -1.04
CPS1P31327 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.55□□□□□ -1.04
CPS1P31327 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 AC011379.1-201ENST00000508713 3025 ntBASIC8.55□□□□□ -1.04
CPS1P31327 YES1P1-201ENST00000418510 1628 ntBASIC8.55□□□□□ -1.04
CPS1P31327 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CPS1P31327 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.55□□□□□ -1.04
CPS1P31327 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.55□□□□□ -1.04
CPS1P31327 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CPS1P31327 U8.4-201ENST00000363626 134 ntBASIC8.54□□□□□ -1.04
CPS1P31327 RNU11-6P-201ENST00000391127 133 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 HMGA1P8-201ENST00000414130 321 ntBASIC8.54□□□□□ -1.04
CPS1P31327 UBE2V1P14-201ENST00000415815 558 ntBASIC8.54□□□□□ -1.04
CPS1P31327 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.54□□□□□ -1.04
CPS1P31327 CYP4F30P-202ENST00000420048 405 ntBASIC8.54□□□□□ -1.04
CPS1P31327 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.54□□□□□ -1.04
CPS1P31327 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 OR7E157P-201ENST00000494376 911 ntBASIC8.54□□□□□ -1.04
CPS1P31327 RNU6-615P-201ENST00000516065 106 ntBASIC8.54□□□□□ -1.04
CPS1P31327 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.54□□□□□ -1.04
CPS1P31327 AC096861.1-201ENST00000616652 240 ntBASIC8.54□□□□□ -1.04
CPS1P31327 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.54□□□□□ -1.04
CPS1P31327 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.54□□□□□ -1.04
CPS1P31327 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CPS1P31327 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms