Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 MIR4776-2-201ENST00000580204 80 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.33□□□□□ -1.24
COL1A1P02452 AC024589.2-201ENST00000605642 1294 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 AC116667.2-201ENST00000641075 823 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 AL391261.1-201ENST00000555712 1479 ntBASIC7.33□□□□□ -1.24
COL1A1P02452 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL1A1P02452 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.33□□□□□ -1.24
COL1A1P02452 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.33□□□□□ -1.24
COL1A1P02452 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
COL1A1P02452 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL1A1P02452 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 AC012254.3-201ENST00000591183 2117 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 RNA5SP375-201ENST00000362975 119 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 RNU105B-201ENST00000364478 208 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 OR7E101P-201ENST00000400428 513 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 Z93019.1-201ENST00000416450 973 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.32□□□□□ -1.24
COL1A1P02452 NMD3P2-201ENST00000421815 761 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC7.32□□□□□ -1.24
COL1A1P02452 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.32□□□□□ -1.24
COL1A1P02452 SNORD95-201ENST00000579879 68 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.32□□□□□ -1.24
COL1A1P02452 AL391262.1-201ENST00000556558 1992 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.32□□□□□ -1.24
COL1A1P02452 AOX3P-204ENST00000491025 2107 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 TMEM75-201ENST00000624314 2165 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 AC027088.4-201ENST00000611559 1947 ntBASIC7.32□□□□□ -1.24
COL1A1P02452 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.32□□□□□ -1.24
COL1A1P02452 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL1A1P02452 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.32□□□□□ -1.24
COL1A1P02452 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 RNA5SP350-201ENST00000363298 111 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL1A1P02452 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.31□□□□□ -1.24
COL1A1P02452 AC245060.4-201ENST00000413293 1121 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 SUMO2P1-206ENST00000445436 284 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.31□□□□□ -1.24
COL1A1P02452 SNORA70.20-201ENST00000516848 126 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 IGKV2-19-201ENST00000518132 283 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.31□□□□□ -1.24
COL1A1P02452 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.31□□□□□ -1.24
COL1A1P02452 AC011497.2-201ENST00000600255 639 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 RN7SL787P-201ENST00000613000 284 ntBASIC7.31□□□□□ -1.24
COL1A1P02452 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.31□□□□□ -1.24
COL1A1P02452 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.31□□□□□ -1.24
COL1A1P02452 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
COL1A1P02452 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
COL1A1P02452 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
COL1A1P02452 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.31□□□□□ -1.24
COL1A1P02452 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
COL1A1P02452 MIR375-201ENST00000362103 64 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 MIR937-201ENST00000401271 86 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 RN7SKP278-201ENST00000410504 342 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AL513325.1-201ENST00000417716 1034 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.3□□□□□ -1.24
COL1A1P02452 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 AC127526.2-201ENST00000426436 775 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.3□□□□□ -1.24
COL1A1P02452 CT45A11P-201ENST00000448043 1134 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 IGLV3-30-201ENST00000524362 298 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
COL1A1P02452 MIR4489-201ENST00000578869 62 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.3□□□□□ -1.24
COL1A1P02452 uc_338.26-201ENST00000612659 160 ntBASIC7.3□□□□□ -1.24
COL1A1P02452 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms