Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
TNFP01375 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TNFP01375 AC073342.2-201ENST00000595842 1800 ntBASIC6.02□□□□□ -1.45
TNFP01375 AC005618.1-201ENST00000606901 3148 ntBASIC6.01□□□□□ -1.45
TNFP01375 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AC105749.1-201ENST00000631338 2008 ntBASIC6.01□□□□□ -1.45
TNFP01375 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 RAD17P2-201ENST00000451754 1977 ntBASIC6.01□□□□□ -1.45
TNFP01375 RNFT1P3-201ENST00000340898 1052 ntBASIC6.01□□□□□ -1.45
TNFP01375 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 OR7E25P-201ENST00000344844 931 ntBASIC6.01□□□□□ -1.45
TNFP01375 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 RNA5SP477-201ENST00000362639 119 ntBASIC6.01□□□□□ -1.45
TNFP01375 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AL451136.1-201ENST00000435399 325 ntBASIC6.01□□□□□ -1.45
TNFP01375 FABP5P2-201ENST00000439042 408 ntBASIC6.01□□□□□ -1.45
TNFP01375 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 SUMO2P10-201ENST00000452006 288 ntBASIC6.01□□□□□ -1.45
TNFP01375 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.01□□□□□ -1.45
TNFP01375 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.01□□□□□ -1.45
TNFP01375 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.01□□□□□ -1.45
TNFP01375 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AP005119.1-201ENST00000580956 292 ntBASIC6.01□□□□□ -1.45
TNFP01375 AC005244.1-201ENST00000582566 339 ntBASIC6.01□□□□□ -1.45
TNFP01375 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AC067852.5-201ENST00000589299 310 ntBASIC6.01□□□□□ -1.45
TNFP01375 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
TNFP01375 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AC108673.3-201ENST00000609183 335 ntBASIC6.01□□□□□ -1.45
TNFP01375 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AL137067.2-201ENST00000621202 131 ntBASIC6.01□□□□□ -1.45
TNFP01375 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 AC022726.2-201ENST00000634673 547 ntBASIC6.01□□□□□ -1.45
TNFP01375 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
TNFP01375 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 AC119674.1-213ENST00000641177 1386 ntBASIC6.01□□□□□ -1.45
TNFP01375 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
TNFP01375 AC107980.1-201ENST00000558671 3355 ntBASIC6.01□□□□□ -1.45
TNFP01375 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TNFP01375 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.01□□□□□ -1.45
TNFP01375 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TNFP01375 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
TNFP01375 PSG10P-201ENST00000501199 1500 ntBASIC6□□□□□ -1.45
TNFP01375 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 AC024587.1-201ENST00000505925 2157 ntBASIC6□□□□□ -1.45
TNFP01375 AC022905.1-201ENST00000503430 3048 ntBASIC6□□□□□ -1.45
TNFP01375 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 RNA5SP375-201ENST00000362975 119 ntBASIC6□□□□□ -1.45
TNFP01375 RNA5SP510-201ENST00000364697 99 ntBASIC6□□□□□ -1.45
TNFP01375 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TNFP01375 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6□□□□□ -1.45
TNFP01375 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 CDY8P-201ENST00000428380 1279 ntBASIC6□□□□□ -1.45
TNFP01375 RPS29P14-201ENST00000431518 171 ntBASIC6□□□□□ -1.45
TNFP01375 TUBB4BP6-201ENST00000437576 479 ntBASIC6□□□□□ -1.45
TNFP01375 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 CDY20P-201ENST00000447528 1279 ntBASIC6□□□□□ -1.45
TNFP01375 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6□□□□□ -1.45
TNFP01375 HLA-DPA3-207ENST00000454398 229 ntBASIC6□□□□□ -1.45
TNFP01375 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6□□□□□ -1.45
TNFP01375 SCARNA18.1-201ENST00000516330 83 ntBASIC6□□□□□ -1.45
TNFP01375 RNA5SP438-201ENST00000516561 112 ntBASIC6□□□□□ -1.45
TNFP01375 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6□□□□□ -1.45
TNFP01375 IGKV2-4-201ENST00000523070 340 ntBASIC6□□□□□ -1.45
TNFP01375 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms