Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RPL23AP40-201ENST00000487630 390 ntBASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
NPC1L1Q9UHC9 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 TTC3P1-201ENST00000399586 6081 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 RNFT1P3-201ENST00000340898 1052 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AL360271.1-201ENST00000395679 510 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 MYL6P5-201ENST00000412707 459 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 RPS17P17-201ENST00000419392 409 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AL731534.1-201ENST00000434711 269 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 VN1R110P-201ENST00000438988 971 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 RBPJP7-201ENST00000442803 1447 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 RBPJP5-201ENST00000449433 1447 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 SNORA81.2-201ENST00000516868 170 ntBASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
NPC1L1Q9UHC9 HSPD1P8-201ENST00000400121 1658 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 PSG10P-201ENST00000501199 1500 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AL121835.1-201ENST00000404250 354 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 BX284632.2-201ENST00000421091 399 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AMYP1-201ENST00000440059 1023 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AL512605.1-202ENST00000441919 381 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AL359955.2-201ENST00000445380 353 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC104164.1-201ENST00000460282 590 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 TPM3P3-201ENST00000521343 354 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC079905.1-201ENST00000549280 475 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 LYARP1-201ENST00000436977 1501 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 AC068769.1-201ENST00000474767 2426 ntBASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
NPC1L1Q9UHC9 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AL359976.1-201ENST00000418655 3528 ntBASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.18□□□□□ -1.1
NPC1L1Q9UHC9 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms