Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC010894.1-201ENST00000313760 361 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 RNU6-1257P-201ENST00000384625 110 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 MIR621-201ENST00000384919 96 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 MIR1275-201ENST00000408770 80 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AL359885.1-201ENST00000415786 903 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AL358876.1-201ENST00000453364 1075 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC099340.1-201ENST00000475247 599 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 OR4A21P-201ENST00000532759 944 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 CKS1BP1-201ENST00000555221 240 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC037479.1-201ENST00000558361 625 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 MIR3135A-201ENST00000578460 77 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC073342.3-201ENST00000624211 193 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 AL033543.1-201ENST00000623440 13454 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RNF31Q96EP0 SEPT7P7-201ENST00000420492 1301 ntBASIC6.44□□□□□ -1.38
RNF31Q96EP0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF31Q96EP0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC110792.3-201ENST00000595906 1614 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC217777.1-201ENST00000570034 1471 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 RNU6-618P-201ENST00000363518 112 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 RNU4-40P-201ENST00000364351 143 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 RNA5SP77-201ENST00000365394 120 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AL590762.1-201ENST00000391782 432 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC026310.1-201ENST00000396004 378 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 MTCO2P8-201ENST00000412213 658 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 PCNPP4-201ENST00000414817 517 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 AL121882.1-201ENST00000422893 417 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AL512637.2-201ENST00000431287 1256 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AL117351.1-201ENST00000438864 766 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 ARMC4P1-201ENST00000438905 707 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 GAPDHP37-201ENST00000442317 968 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RNF31Q96EP0 BX323845.2-201ENST00000458382 234 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 AP005202.1-201ENST00000489915 867 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC091849.1-201ENST00000509920 121 ntBASIC6.43□□□□□ -1.38
RNF31Q96EP0 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.43□□□□□ -1.38
RNF31Q96EP0 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms