Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
TOPBP1Q92547 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 CYCSP12-201ENST00000437729 300 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 SDC4P-201ENST00000453285 601 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
TOPBP1Q92547 AL139099.4-201ENST00000614802 114 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 MIR6837-201ENST00000620884 64 ntBASIC9.97□□□□□ -0.81
TOPBP1Q92547 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC9.96□□□□□ -0.81
TOPBP1Q92547 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC9.96□□□□□ -0.81
TOPBP1Q92547 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC9.96□□□□□ -0.81
TOPBP1Q92547 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
TOPBP1Q92547 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 AC007938.2-201ENST00000604666 2634 ntBASIC9.96□□□□□ -0.81
TOPBP1Q92547 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
TOPBP1Q92547 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 AC005033.1-201ENST00000428904 813 ntBASIC9.96□□□□□ -0.82
TOPBP1Q92547 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 RPSAP50-201ENST00000481955 852 ntBASIC9.96□□□□□ -0.82
TOPBP1Q92547 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 DCN-210ENST00000547568 823 ntTSL 3 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 uc_338.26-201ENST00000612659 160 ntBASIC9.96□□□□□ -0.82
TOPBP1Q92547 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TOPBP1Q92547 AC092692.1-201ENST00000623625 2595 ntBASIC9.96□□□□□ -0.82
TOPBP1Q92547 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.82
TOPBP1Q92547 AL136981.1-203ENST00000451452 3844 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AFP-201ENST00000226359 1914 ntTSL 5 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC009804.1-201ENST00000400949 179 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC099677.3-201ENST00000427081 395 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC097721.1-201ENST00000427150 1253 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AL645937.3-201ENST00000453647 936 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 RNA5SP228-201ENST00000516232 133 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC090510.2-201ENST00000617465 629 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 AP001784.1-201ENST00000624107 428 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 AC003992.1-201ENST00000635364 557 ntBASIC9.95□□□□□ -0.82
TOPBP1Q92547 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
TOPBP1Q92547 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TOPBP1Q92547 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
TOPBP1Q92547 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.94□□□□□ -0.82
TOPBP1Q92547 RNU1-106P-201ENST00000384382 164 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 MIR223-201ENST00000385204 110 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 RPL37P18-201ENST00000411602 243 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 AL357752.1-201ENST00000412817 349 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 HMGA1P8-201ENST00000414130 321 ntBASIC9.94□□□□□ -0.82
TOPBP1Q92547 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms