Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 LINC00294-201ENST00000631190 3306 ntBASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
SCUBE3Q8IX30 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 ZNF192P2-201ENST00000402215 1383 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 OR9K2-201ENST00000305377 1122 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RNA5SP27-201ENST00000363839 119 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 Y_RNA.296-201ENST00000364930 108 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RNU6-297P-201ENST00000384636 107 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RNU6-780P-201ENST00000391030 104 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC007066.1-201ENST00000392902 381 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RPSAP42-201ENST00000403415 878 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 SNORD3J-201ENST00000408473 190 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 PPIAP25-201ENST00000420177 540 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 ELOBP1-201ENST00000447693 357 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RPL39P6-201ENST00000448289 150 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RPL30P9-201ENST00000465586 330 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 LARP1BP2-201ENST00000486594 519 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RPL7AP2-201ENST00000496515 740 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC026427.2-201ENST00000506228 536 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC108078.1-201ENST00000508073 725 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 MTND4LP22-201ENST00000508209 276 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC112225.1-201ENST00000508230 297 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RNU7-179P-201ENST00000516608 68 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AP001893.2-201ENST00000526949 202 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 OR4A11P-201ENST00000529557 906 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 CBX3P5-201ENST00000552017 521 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 APEX1-214ENST00000557054 888 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC087645.1-201ENST00000588528 291 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 LINC00674-202ENST00000590734 160 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AL158151.4-201ENST00000600965 507 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC069304.2-201ENST00000605154 435 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC005962.2-201ENST00000611427 652 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 XRCC6P4-201ENST00000518193 2067 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC073324.1-201ENST00000425993 1435 ntBASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
SCUBE3Q8IX30 AC245060.6-201ENST00000624350 8420 ntBASIC8.52□□□□□ -1.04
SCUBE3Q8IX30 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
SCUBE3Q8IX30 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms