Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 RNFT1P3-201ENST00000340898 1052 ntBASIC5.12□□□□□ -1.59
LMO4P61968 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 OR11H13P-201ENST00000359695 979 ntBASIC5.12□□□□□ -1.59
LMO4P61968 RNA5SP273-201ENST00000362484 113 ntBASIC5.12□□□□□ -1.59
LMO4P61968 SNORA43.1-201ENST00000364863 140 ntBASIC5.12□□□□□ -1.59
LMO4P61968 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMO4P61968 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 UBE2V1P14-201ENST00000415815 558 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 RPS3P2-201ENST00000421346 701 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC097721.1-201ENST00000427150 1253 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AL512637.1-201ENST00000439523 1231 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 AC016908.1-201ENST00000442571 1219 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC011742.2-201ENST00000443818 352 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 HLA-DPA3-207ENST00000454398 229 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMO4P61968 RNA5SP271-201ENST00000516700 88 ntBASIC5.12□□□□□ -1.59
LMO4P61968 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.12□□□□□ -1.59
LMO4P61968 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LMO4P61968 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 AP005119.1-201ENST00000580956 292 ntBASIC5.12□□□□□ -1.59
LMO4P61968 MIR3614-201ENST00000581261 86 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC090236.2-201ENST00000587933 1101 ntBASIC5.12□□□□□ -1.59
LMO4P61968 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.12□□□□□ -1.59
LMO4P61968 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.12□□□□□ -1.59
LMO4P61968 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AL445649.1-201ENST00000615941 691 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.12□□□□□ -1.59
LMO4P61968 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 AC092111.1-201ENST00000618256 3358 ntBASIC5.12□□□□□ -1.59
LMO4P61968 AC006213.6-201ENST00000623722 4179 ntBASIC5.12□□□□□ -1.59
LMO4P61968 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 AL157831.2-201ENST00000564681 3095 ntBASIC5.12□□□□□ -1.59
LMO4P61968 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 TET1P1-201ENST00000426627 2301 ntBASIC5.12□□□□□ -1.59
LMO4P61968 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LMO4P61968 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.12□□□□□ -1.59
LMO4P61968 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.11□□□□□ -1.59
LMO4P61968 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LMO4P61968 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LMO4P61968 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
LMO4P61968 SNORA81-201ENST00000408493 178 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 CYP4F30P-202ENST00000420048 405 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.11□□□□□ -1.59
LMO4P61968 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.11□□□□□ -1.59
LMO4P61968 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 TRIM60P16-201ENST00000444048 694 ntBASIC5.11□□□□□ -1.59
LMO4P61968 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.11□□□□□ -1.59
LMO4P61968 AC073109.1-201ENST00000445066 978 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 FTLP8-201ENST00000446770 267 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 AC005077.1-201ENST00000449226 375 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AC026254.2-201ENST00000475295 371 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.11□□□□□ -1.59
LMO4P61968 IGLVIV-64-201ENST00000518581 301 ntBASIC5.11□□□□□ -1.59
LMO4P61968 IGKV3D-34-201ENST00000522638 302 ntBASIC5.11□□□□□ -1.59
LMO4P61968 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.11□□□□□ -1.59
LMO4P61968 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.11□□□□□ -1.59
LMO4P61968 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms