Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.15□□□□□ -1.27
COL4A5P29400 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.15□□□□□ -1.27
COL4A5P29400 AC003992.1-201ENST00000635364 557 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.15□□□□□ -1.27
COL4A5P29400 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A5P29400 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A5P29400 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL4A5P29400 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
COL4A5P29400 AC245060.6-201ENST00000624350 8420 ntBASIC7.15□□□□□ -1.27
COL4A5P29400 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.15□□□□□ -1.27
COL4A5P29400 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 AC114786.1-201ENST00000512892 1415 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
COL4A5P29400 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL4A5P29400 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A5P29400 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
COL4A5P29400 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.14□□□□□ -1.27
COL4A5P29400 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A5P29400 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 AL606490.1-201ENST00000452266 765 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 HAUS8P1-201ENST00000549005 542 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 AP002884.5-201ENST00000595053 1132 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 SUGT1P3-202ENST00000604259 383 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.14□□□□□ -1.27
COL4A5P29400 AL021368.3-201ENST00000607119 578 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AL512329.2-201ENST00000607350 548 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AC008115.4-201ENST00000619780 775 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
COL4A5P29400 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 AL592429.1-201ENST00000403909 1473 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AC096921.2-201ENST00000561507 1916 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A5P29400 MAPK10-344ENST00000641718 3746 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AL590004.4-201ENST00000566733 7060 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 AC013488.1-201ENST00000526618 1838 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.14□□□□□ -1.27
COL4A5P29400 FO082842.1-201ENST00000423552 1370 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 AC009166.2-201ENST00000624410 2833 ntBASIC7.14□□□□□ -1.27
COL4A5P29400 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL4A5P29400 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A5P29400 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A5P29400 RNA5SP211-201ENST00000365516 117 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 AC005042.1-201ENST00000393397 800 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 PSMD10P3-201ENST00000437000 448 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 AC245047.2-201ENST00000441060 530 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 RPL32P33-201ENST00000487023 394 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 RPS23P1-201ENST00000491662 432 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A5P29400 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 RPSAP73-201ENST00000614820 330 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.13□□□□□ -1.27
COL4A5P29400 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 CASC19-264ENST00000641912 1184 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A5P29400 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.13□□□□□ -1.27
COL4A5P29400 CASC19-248ENST00000641674 1356 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL4A5P29400 AC092821.3-202ENST00000641304 2767 ntBASIC7.13□□□□□ -1.27
COL4A5P29400 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL4A5P29400 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL4A5P29400 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 RNA5SP507-201ENST00000363603 121 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.12□□□□□ -1.27
COL4A5P29400 SNORA56-201ENST00000383966 129 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AC136624.1-201ENST00000400791 413 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 RN7SKP125-201ENST00000410481 302 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AL357752.1-201ENST00000412817 349 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 PTCD2P2-201ENST00000415579 1095 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.12□□□□□ -1.27
COL4A5P29400 AC083795.1-201ENST00000491760 320 ntBASIC7.12□□□□□ -1.27
COL4A5P29400 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL4A5P29400 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms