Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC013268.3-201ENST00000262716 2324 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SMG1P5-202ENST00000529428 4219 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SMG1P2-201ENST00000566127 4221 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 OR7E156P-201ENST00000400303 464 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 HMGA1P8-201ENST00000414130 321 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 RPL21P50-201ENST00000417698 477 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 PSMD10P2-201ENST00000432890 672 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SUMO2P10-201ENST00000452006 288 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 RANP2-201ENST00000456833 229 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 RPL5P12-201ENST00000477071 851 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC092865.1-201ENST00000544395 1023 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC037479.1-201ENST00000558361 625 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 NPIPB1P-202ENST00000588786 828 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC003992.1-201ENST00000635364 557 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 OR7A1P-202ENST00000641542 1158 ntBASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.43□□□□□ -1.22
UPF3BQ9BZI7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 IMMTP1-201ENST00000435590 2219 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 RNA5SP433-201ENST00000364491 114 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 RN7SKP129-201ENST00000410288 299 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC016908.1-201ENST00000442571 1219 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC112187.1-201ENST00000455837 479 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 IGHV4-55-201ENST00000520889 368 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC008055.1-201ENST00000547032 609 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 DYNLL1P1-201ENST00000595442 269 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
UPF3BQ9BZI7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 AL157702.1-201ENST00000398764 426 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 VIM2P-201ENST00000402383 1294 ntBASIC7.41□□□□□ -1.22
UPF3BQ9BZI7 RNU4-64P-201ENST00000410795 131 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms