Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC027334.1-201ENST00000603257 310 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC100767.2-201ENST00000604840 693 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC008555.7-201ENST00000605008 583 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC103703.1-201ENST00000634783 663 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC011416.1-201ENST00000514947 1732 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AL117378.2-201ENST00000622916 1337 ntBASIC8.62□□□□□ -1.03
CCDC7Q96M83 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC7Q96M83 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC7Q96M83 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC7Q96M83 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
CCDC7Q96M83 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC7Q96M83 AC024651.2-201ENST00000562480 2098 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC079922.1-201ENST00000443291 359 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC119501.1-201ENST00000603646 475 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 USP9YP3-201ENST00000434481 1766 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 MTCO1P28-201ENST00000574177 1528 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC090651.1-201ENST00000567865 634 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 MRPS21P8-201ENST00000569196 235 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 MIR6768-201ENST00000610734 72 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC109309.2-201ENST00000612597 332 ntBASIC8.61□□□□□ -1.03
CCDC7Q96M83 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC7Q96M83 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC012213.2-201ENST00000562917 4597 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC027575.3-201ENST00000583058 2747 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 RN7SKP229-201ENST00000410465 302 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 RPL23AP19-201ENST00000436229 369 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 HLA-DPA3-207ENST00000454398 229 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 NXT1P1-201ENST00000458481 316 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 RN7SL174P-201ENST00000475578 289 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC095052.1-201ENST00000509955 863 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC092332.1-201ENST00000563684 829 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC8.6□□□□□ -1.03
CCDC7Q96M83 AC004801.6-201ENST00000616571 978 ntBASIC8.6□□□□□ -1.03
CCDC7Q96M83 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC7Q96M83 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC7Q96M83 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
CCDC7Q96M83 AL121768.1-201ENST00000613917 2544 ntBASIC8.59□□□□□ -1.03
CCDC7Q96M83 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.59□□□□□ -1.03
CCDC7Q96M83 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
CCDC7Q96M83 AL354854.1-201ENST00000455940 1363 ntBASIC8.59□□□□□ -1.03
CCDC7Q96M83 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC7Q96M83 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
CCDC7Q96M83 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.59□□□□□ -1.03
CCDC7Q96M83 OR7E25P-201ENST00000344844 931 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms