Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC078857.1-201ENST00000469870 667 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 MARK2P8-201ENST00000476069 952 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC112184.1-201ENST00000505179 312 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC131392.1-201ENST00000506490 633 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.7□□□□□ -1.34
SLC6A4P31645 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC121758.1-202ENST00000556917 658 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC244034.2-201ENST00000562504 509 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 RN7SL475P-201ENST00000583379 298 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 KATNBL1P5-201ENST00000605015 517 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC025171.4-201ENST00000607250 1047 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC005828.7-201ENST00000607331 556 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 OR7M1P-201ENST00000608946 533 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AL359091.2-201ENST00000609303 556 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 MIR6085-201ENST00000618314 110 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 AC074276.2-201ENST00000619891 348 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AL122023.1-201ENST00000622847 530 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 AL445984.1-201ENST00000637834 659 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.7□□□□□ -1.34
SLC6A4P31645 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 LINC01613-201ENST00000561476 2780 ntBASIC6.7□□□□□ -1.34
SLC6A4P31645 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.7□□□□□ -1.34
SLC6A4P31645 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.7□□□□□ -1.34
SLC6A4P31645 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SLC6A4P31645 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC092821.3-202ENST00000641304 2767 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 ZNF812P-201ENST00000457674 1694 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SLC6A4P31645 YWHAZP4-201ENST00000392459 708 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
SLC6A4P31645 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC013268.2-201ENST00000420753 337 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 GTF2IP14-201ENST00000441415 586 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 TRBV8-1-201ENST00000481590 279 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC093801.2-201ENST00000503966 1050 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 RNA5SP418-201ENST00000515951 117 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 RN7SKP5-201ENST00000517045 272 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AP000662.1-201ENST00000530952 487 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 OR4A41P-201ENST00000533053 928 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC074029.2-201ENST00000551045 634 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC023310.2-201ENST00000553844 547 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.69□□□□□ -1.34
SLC6A4P31645 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 MIR4271-201ENST00000582451 67 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.69□□□□□ -1.34
SLC6A4P31645 AC073046.2-201ENST00000604756 527 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC034236.3-201ENST00000605999 461 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 CR589904.2-201ENST00000612533 440 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC005156.1-201ENST00000613371 573 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 MIR7109-201ENST00000613748 65 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 LINC00216-201ENST00000623548 1126 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms