Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 ITPK1-AS1-201ENST00000553639 4701 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 RN7SKP29-201ENST00000410957 272 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC104164.1-201ENST00000460282 590 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 RPL15P21-201ENST00000495592 567 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC9.98□□□□□ -0.81
IFT140Q96RY7 OR51K1P-201ENST00000510214 950 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 OR6M2P-201ENST00000529831 871 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 AC008115.3-201ENST00000614874 549 ntBASIC9.98□□□□□ -0.81
IFT140Q96RY7 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
IFT140Q96RY7 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 AC009237.3-203ENST00000442128 3551 ntBASIC9.97□□□□□ -0.81
IFT140Q96RY7 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 U3.2-201ENST00000362981 210 ntBASIC9.97□□□□□ -0.81
IFT140Q96RY7 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 AL645733.1-201ENST00000402250 217 ntBASIC9.97□□□□□ -0.81
IFT140Q96RY7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 AURKAPS1-201ENST00000451805 1212 ntBASIC9.97□□□□□ -0.81
IFT140Q96RY7 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 SNORA58-201ENST00000505219 137 ntBASIC9.97□□□□□ -0.81
IFT140Q96RY7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
IFT140Q96RY7 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
IFT140Q96RY7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
IFT140Q96RY7 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
IFT140Q96RY7 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
IFT140Q96RY7 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
IFT140Q96RY7 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC9.96□□□□□ -0.81
IFT140Q96RY7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC9.96□□□□□ -0.81
IFT140Q96RY7 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC005033.1-201ENST00000428904 813 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC021146.10-201ENST00000515628 706 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 RN7SKP66-201ENST00000516681 231 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 HNRNPCP1-201ENST00000556181 766 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC015720.2-201ENST00000567709 334 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 MIR4436B2-201ENST00000581415 91 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 MIR4436B1-201ENST00000583272 91 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 AC087269.2-201ENST00000641764 975 ntBASIC9.96□□□□□ -0.82
IFT140Q96RY7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.96□□□□□ -0.82
IFT140Q96RY7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
IFT140Q96RY7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
IFT140Q96RY7 PARP4P2-201ENST00000446672 3326 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 RNU11-6P-201ENST00000391127 133 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 UBE2V1P14-201ENST00000415815 558 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC245047.2-201ENST00000441060 530 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC092967.1-201ENST00000449016 481 ntBASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC9.95□□□□□ -0.82
IFT140Q96RY7 AC147055.3-201ENST00000510547 851 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms