Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC119403.2-201ENST00000590960 598 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC087269.2-201ENST00000641764 975 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AL590065.1-201ENST00000603371 4774 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC089998.1-201ENST00000548575 3141 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AC073342.2-201ENST00000595842 1800 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AL159987.1-201ENST00000347911 293 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 RNA5SP92-201ENST00000516437 110 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 AP000550.3-201ENST00000637734 379 ntBASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ALMS1Q8TCU4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 RPL36P18-201ENST00000419316 318 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 RPS7P3-201ENST00000443360 580 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 RPS3AP15-201ENST00000483874 781 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 OR51A1P-201ENST00000511110 946 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 CASC19-243ENST00000641588 1546 ntBASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ALMS1Q8TCU4 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC016583.1-201ENST00000624221 2431 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 RNVU1-6-201ENST00000364688 164 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 MIR640-201ENST00000385086 96 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL133270.1-201ENST00000402635 279 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC022832.1-201ENST00000530718 645 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL049539.1-201ENST00000611964 459 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC090510.2-201ENST00000617465 629 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC008124.1-201ENST00000609803 9730 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC119674.1-204ENST00000641348 1343 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 RBMY1HP-201ENST00000382759 1389 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC108075.1-201ENST00000424692 529 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 RAB28P2-201ENST00000454299 641 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 RPL35AP19-201ENST00000469425 329 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC117395.1-201ENST00000487390 403 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC009120.3-201ENST00000563335 499 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 MRPS21P9-201ENST00000571150 257 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 CYCSP1-201ENST00000604815 315 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC100827.5-201ENST00000615883 426 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AL390318.1-201ENST00000624564 687 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC003992.1-201ENST00000635364 557 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 AC068733.2-201ENST00000605434 1418 ntBASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ALMS1Q8TCU4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms