Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR6823-201ENST00000622118 61 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC011471.4-201ENST00000638271 216 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 MRPS17P1-201ENST00000596009 3130 ntBASIC9.18□□□□□ -0.94
RC3H1Q5TC82 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC9.18□□□□□ -0.94
RC3H1Q5TC82 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LRRC37A11P-202ENST00000579258 3717 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 MTCO1P28-201ENST00000574177 1528 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC090181.3-201ENST00000624777 1514 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PPBPP2-201ENST00000513150 1362 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 FGF7P2-201ENST00000332473 296 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 RNA5SP176-201ENST00000390956 110 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL133260.1-201ENST00000405720 405 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 CHCHD3P1-201ENST00000425516 676 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 GAPDHP19-201ENST00000431768 1005 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ZNF114P1-201ENST00000453500 292 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 CBX1P5-201ENST00000475330 559 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC069304.1-201ENST00000491593 704 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 TPT1P3-201ENST00000492841 512 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 Y_RNA.702-201ENST00000516843 96 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 CASC11-203ENST00000519071 791 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 IGHVIII-26-1-201ENST00000520387 250 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PDCL2P2-201ENST00000533651 189 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 MIR4310-201ENST00000582950 57 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AC008498.1-201ENST00000613012 531 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL590410.1-201ENST00000617925 333 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AF246928.1-201ENST00000623768 87 ntBASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.17□□□□□ -0.94
RC3H1Q5TC82 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC105342.1-201ENST00000378334 6848 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AL603865.2-201ENST00000401679 213 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AL079341.1-201ENST00000404701 1207 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 MIR548F1-201ENST00000408667 84 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 RNU2-41P-201ENST00000410991 178 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 RPL7AP51-201ENST00000422016 760 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 TRBV29OR9-2-201ENST00000427589 333 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 MYO5BP3-201ENST00000431872 1279 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC9.16□□□□□ -0.94
RC3H1Q5TC82 AC104698.1-201ENST00000435671 276 ntBASIC9.16□□□□□ -0.94
RC3H1Q5TC82 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms