RNA–Protein interactions for RNA: ENST00000408667.1

MIR548F1-201, Transcript of microRNA 548f-1, humanhuman

BASIC

Gene MIR548F1, Length 84 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F1-201ENST00000408667 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
MIR548F1-201ENST00000408667 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
MIR548F1-201ENST00000408667 SENP3Q9H4L4 574 aaPredicted RBP21.34■■□□□ 1.01
MIR548F1-201ENST00000408667 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
MIR548F1-201ENST00000408667 FOXD1Q16676 465 aa19.76■□□□□ 0.75
MIR548F1-201ENST00000408667 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
MIR548F1-201ENST00000408667 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
MIR548F1-201ENST00000408667 MSH5O43196 834 aa18.57■□□□□ 0.56
MIR548F1-201ENST00000408667 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
MIR548F1-201ENST00000408667 ADRA2BP18089 450 aa18.52■□□□□ 0.56
MIR548F1-201ENST00000408667 POTEDQ86YR6 584 aa17.74■□□□□ 0.43
MIR548F1-201ENST00000408667 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
MIR548F1-201ENST00000408667 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
MIR548F1-201ENST00000408667 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
MIR548F1-201ENST00000408667 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
MIR548F1-201ENST00000408667 CNKSR2Q8WXI2 1034 aa16.5■□□□□ 0.23
MIR548F1-201ENST00000408667 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
MIR548F1-201ENST00000408667 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
MIR548F1-201ENST00000408667 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
MIR548F1-201ENST00000408667 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
MIR548F1-201ENST00000408667 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
MIR548F1-201ENST00000408667 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
MIR548F1-201ENST00000408667 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
MIR548F1-201ENST00000408667 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
MIR548F1-201ENST00000408667 KCNA4P22459 653 aa15.74■□□□□ 0.11
MIR548F1-201ENST00000408667 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
MIR548F1-201ENST00000408667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
MIR548F1-201ENST00000408667 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
MIR548F1-201ENST00000408667 SLC4A2P04920 1241 aa15.13■□□□□ 0.01
MIR548F1-201ENST00000408667 APLP2Q06481 763 aa15.04■□□□□ -0
MIR548F1-201ENST00000408667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
MIR548F1-201ENST00000408667 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
MIR548F1-201ENST00000408667 CAPN15O75808 1086 aa15□□□□□ -0.01
MIR548F1-201ENST00000408667 SLC4A1APQ9BWU0 796 aaKnown RBP14.97□□□□□ -0.01
MIR548F1-201ENST00000408667 SPINK5Q9NQ38 1064 aaPredicted RBP14.93□□□□□ -0.02
MIR548F1-201ENST00000408667 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
MIR548F1-201ENST00000408667 MYCNP04198 464 aaPredicted RBP14.83□□□□□ -0.04
MIR548F1-201ENST00000408667 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
MIR548F1-201ENST00000408667 DSG3P32926 999 aa14.82□□□□□ -0.04
MIR548F1-201ENST00000408667 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
MIR548F1-201ENST00000408667 FOXD4L1Q9NU39 408 aa14.73□□□□□ -0.05
MIR548F1-201ENST00000408667 ABCB7O75027 752 aa14.6□□□□□ -0.07
MIR548F1-201ENST00000408667 ZBTB22O15209 634 aa14.41□□□□□ -0.1
MIR548F1-201ENST00000408667 POLA2Q14181 598 aa14.4□□□□□ -0.1
MIR548F1-201ENST00000408667 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
MIR548F1-201ENST00000408667 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
MIR548F1-201ENST00000408667 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
MIR548F1-201ENST00000408667 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
MIR548F1-201ENST00000408667 POTEHQ6S545 545 aa13.97□□□□□ -0.17
MIR548F1-201ENST00000408667 FBLN2P98095 1184 aa13.94□□□□□ -0.18
MIR548F1-201ENST00000408667 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
MIR548F1-201ENST00000408667 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
MIR548F1-201ENST00000408667 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
MIR548F1-201ENST00000408667 EHMT2Q96KQ7 1210 aa13.88□□□□□ -0.19
MIR548F1-201ENST00000408667 CHRDL2Q6WN34 429 aa13.79□□□□□ -0.2
MIR548F1-201ENST00000408667 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
MIR548F1-201ENST00000408667 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
MIR548F1-201ENST00000408667 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
MIR548F1-201ENST00000408667 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
MIR548F1-201ENST00000408667 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
MIR548F1-201ENST00000408667 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
MIR548F1-201ENST00000408667 PITPNM1O00562 1244 aa13.56□□□□□ -0.24
MIR548F1-201ENST00000408667 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
MIR548F1-201ENST00000408667 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
MIR548F1-201ENST00000408667 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
MIR548F1-201ENST00000408667 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
MIR548F1-201ENST00000408667 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
MIR548F1-201ENST00000408667 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
MIR548F1-201ENST00000408667 PRR29P0C7W0 189 aa13.26□□□□□ -0.29
MIR548F1-201ENST00000408667 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
MIR548F1-201ENST00000408667 HAX1O00165 279 aa13.24□□□□□ -0.29
MIR548F1-201ENST00000408667 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
MIR548F1-201ENST00000408667 SP7Q8TDD2 431 aaPredicted RBP13.18□□□□□ -0.3
MIR548F1-201ENST00000408667 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
MIR548F1-201ENST00000408667 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
MIR548F1-201ENST00000408667 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
MIR548F1-201ENST00000408667 FARP1Q9Y4F1 1045 aaPredicted RBP12.95□□□□□ -0.34
MIR548F1-201ENST00000408667 EVX2Q03828 476 aa12.93□□□□□ -0.34
MIR548F1-201ENST00000408667 PROM2Q8N271 834 aa12.87□□□□□ -0.35
MIR548F1-201ENST00000408667 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
MIR548F1-201ENST00000408667 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
MIR548F1-201ENST00000408667 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
MIR548F1-201ENST00000408667 CLCN6P51797 869 aa12.79□□□□□ -0.36
MIR548F1-201ENST00000408667 GABBR2O75899 941 aa12.76□□□□□ -0.37
MIR548F1-201ENST00000408667 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
MIR548F1-201ENST00000408667 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
MIR548F1-201ENST00000408667 FKBP8Q14318 412 aa12.7□□□□□ -0.38
MIR548F1-201ENST00000408667 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
MIR548F1-201ENST00000408667 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
MIR548F1-201ENST00000408667 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
MIR548F1-201ENST00000408667 MIER1Q8N108 512 aa12.62□□□□□ -0.39
MIR548F1-201ENST00000408667 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
MIR548F1-201ENST00000408667 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
MIR548F1-201ENST00000408667 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
MIR548F1-201ENST00000408667 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
MIR548F1-201ENST00000408667 PHF12Q96QT6 1004 aa12.47□□□□□ -0.41
MIR548F1-201ENST00000408667 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
MIR548F1-201ENST00000408667 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
MIR548F1-201ENST00000408667 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
MIR548F1-201ENST00000408667 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms