Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 AC005042.1-201ENST00000393397 800 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 AURKAPS1-201ENST00000451805 1212 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 IGLV2-34-201ENST00000490007 283 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 RN7SL193P-201ENST00000491708 276 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 HIGD1AP14-201ENST00000507617 282 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.92□□□□□ -1.46
CACNA1BQ00975 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.92□□□□□ -1.46
CACNA1BQ00975 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CACNA1BQ00975 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 HMGB1P20-201ENST00000402555 677 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 LINC01881-201ENST00000416103 412 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 OR5M12P-201ENST00000423388 929 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 SOCS5P1-201ENST00000440415 949 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 CDC42P3-201ENST00000518493 633 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC004232.1-201ENST00000571388 208 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC234771.5-201ENST00000600161 514 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AP004289.1-201ENST00000436307 2205 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC112255.1-201ENST00000624070 2493 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC123769.2-201ENST00000624332 5984 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AL096816.1-201ENST00000623300 2920 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 SNORA70.3-201ENST00000365075 132 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 RPL17P17-201ENST00000419491 557 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 C4BPAP2-201ENST00000428434 478 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 RN7SL481P-201ENST00000477764 299 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 HPRT1P1-201ENST00000509498 657 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.91□□□□□ -1.46
CACNA1BQ00975 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.91□□□□□ -1.46
CACNA1BQ00975 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 RACGAP1P-201ENST00000550663 1879 ntBASIC5.9□□□□□ -1.46
CACNA1BQ00975 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 PSG10P-201ENST00000501199 1500 ntBASIC5.9□□□□□ -1.46
CACNA1BQ00975 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.9□□□□□ -1.46
CACNA1BQ00975 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CACNA1BQ00975 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.9□□□□□ -1.46
CACNA1BQ00975 MTND6P8-201ENST00000503471 522 ntBASIC5.9□□□□□ -1.46
CACNA1BQ00975 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 329.5 ms