Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC10.68□□□□□ -0.7
SMARCA4P51532 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC10.68□□□□□ -0.7
SMARCA4P51532 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
SMARCA4P51532 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SMARCA4P51532 AL121835.1-201ENST00000404250 354 ntBASIC10.68□□□□□ -0.7
SMARCA4P51532 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SMARCA4P51532 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SMARCA4P51532 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC10.67□□□□□ -0.7
SMARCA4P51532 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 RN7SKP125-201ENST00000410481 302 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 METTL15P3-201ENST00000415522 1221 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 AC099677.3-201ENST00000427081 395 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC10.67□□□□□ -0.7
SMARCA4P51532 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC10.67□□□□□ -0.7
SMARCA4P51532 EIF4A2P5-201ENST00000529914 499 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
SMARCA4P51532 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC10.67□□□□□ -0.7
SMARCA4P51532 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC10.67□□□□□ -0.7
SMARCA4P51532 Mico1.1-201ENST00000611698 204 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 RPSAP73-201ENST00000614820 330 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 CASC19-264ENST00000641912 1184 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC10.67□□□□□ -0.7
SMARCA4P51532 SRRM1P3-201ENST00000426911 2678 ntBASIC10.67□□□□□ -0.7
SMARCA4P51532 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SMARCA4P51532 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC016583.1-201ENST00000624221 2431 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA4P51532 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SMARCA4P51532 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA4P51532 PTCD2P2-201ENST00000415579 1095 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC083795.1-201ENST00000491760 320 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 FKBP1AP1-201ENST00000594588 318 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 PPATP2-201ENST00000605635 508 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AL445647.2-201ENST00000615170 130 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 AL592429.1-201ENST00000403909 1473 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 AL136981.1-203ENST00000451452 3844 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC010478.1-201ENST00000601500 6762 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA4P51532 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC096921.2-201ENST00000561507 1916 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 CASC19-248ENST00000641674 1356 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 MROH3P-201ENST00000435735 2676 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC011369.2-201ENST00000624423 1567 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SMARCA4P51532 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SMARCA4P51532 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC10.66□□□□□ -0.7
SMARCA4P51532 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 RPS27P18-201ENST00000431701 247 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 EEF1B2P5-201ENST00000444820 548 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AC009120.1-201ENST00000493458 473 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 AC096996.1-201ENST00000563813 325 ntBASIC10.66□□□□□ -0.7
SMARCA4P51532 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC10.66□□□□□ -0.7
SMARCA4P51532 MFSD8-218ENST00000641186 4448 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.65□□□□□ -0.7
SMARCA4P51532 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SMARCA4P51532 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
SMARCA4P51532 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA4P51532 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA4P51532 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA4P51532 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC10.65□□□□□ -0.7
SMARCA4P51532 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
SMARCA4P51532 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms