Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SOX2P48431 RNU12-2P-201ENST00000364789 156 ntBASIC5.75□□□□□ -1.49
SOX2P48431 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SOX2P48431 RNU6-1000P-201ENST00000391066 106 ntBASIC5.75□□□□□ -1.49
SOX2P48431 AL050335.1-201ENST00000396909 869 ntBASIC5.75□□□□□ -1.49
SOX2P48431 ST13P16-201ENST00000401760 781 ntBASIC5.75□□□□□ -1.49
SOX2P48431 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 MTCO2P1-201ENST00000424648 477 ntBASIC5.75□□□□□ -1.49
SOX2P48431 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 RPL34P27-201ENST00000428810 349 ntBASIC5.75□□□□□ -1.49
SOX2P48431 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.75□□□□□ -1.49
SOX2P48431 ATP5LP4-201ENST00000434169 307 ntBASIC5.75□□□□□ -1.49
SOX2P48431 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 AC092106.1-201ENST00000444291 373 ntBASIC5.75□□□□□ -1.49
SOX2P48431 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 OR52I1-201ENST00000450052 1050 ntBASIC5.75□□□□□ -1.49
SOX2P48431 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 RN7SL91P-201ENST00000469313 291 ntBASIC5.75□□□□□ -1.49
SOX2P48431 RPL12P24-201ENST00000474907 486 ntBASIC5.75□□□□□ -1.49
SOX2P48431 NPM1P17-201ENST00000479221 602 ntBASIC5.75□□□□□ -1.49
SOX2P48431 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 IGHV1-14-201ENST00000523391 241 ntBASIC5.75□□□□□ -1.49
SOX2P48431 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.75□□□□□ -1.49
SOX2P48431 CD24P2-201ENST00000565486 219 ntBASIC5.75□□□□□ -1.49
SOX2P48431 AC091304.4-201ENST00000565703 620 ntBASIC5.75□□□□□ -1.49
SOX2P48431 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.75□□□□□ -1.49
SOX2P48431 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 MIR4428-201ENST00000584884 73 ntBASIC5.75□□□□□ -1.49
SOX2P48431 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 AL137246.2-201ENST00000613439 662 ntBASIC5.75□□□□□ -1.49
SOX2P48431 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 AC018659.2-201ENST00000624690 715 ntBASIC5.75□□□□□ -1.49
SOX2P48431 AC099654.9-201ENST00000637055 678 ntBASIC5.75□□□□□ -1.49
SOX2P48431 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.75□□□□□ -1.49
SOX2P48431 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.75□□□□□ -1.49
SOX2P48431 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 AC090220.1-201ENST00000593078 1699 ntBASIC5.75□□□□□ -1.49
SOX2P48431 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.75□□□□□ -1.49
SOX2P48431 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SOX2P48431 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 GOT2P1-201ENST00000440922 1309 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SOX2P48431 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SOX2P48431 RAB5CP1-201ENST00000395972 580 ntBASIC5.74□□□□□ -1.49
SOX2P48431 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 RN7SKP199-201ENST00000410325 305 ntBASIC5.74□□□□□ -1.49
SOX2P48431 RN7SKP268-201ENST00000411107 316 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC116036.1-201ENST00000412199 367 ntBASIC5.74□□□□□ -1.49
SOX2P48431 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 AL357632.1-201ENST00000426688 643 ntBASIC5.74□□□□□ -1.49
SOX2P48431 ETF1P1-206ENST00000427296 984 ntBASIC5.74□□□□□ -1.49
SOX2P48431 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms