RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 AEBP2Q6ZN18 517 aaPredicted RBP27.41■■□□□ 1.98
RNU6-1000P-201ENST00000391066 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
RNU6-1000P-201ENST00000391066 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
RNU6-1000P-201ENST00000391066 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
RNU6-1000P-201ENST00000391066 PLPPR3Q6T4P5 718 aa21.82■■□□□ 1.08
RNU6-1000P-201ENST00000391066 FOXD1Q16676 465 aa21.56■■□□□ 1.04
RNU6-1000P-201ENST00000391066 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
RNU6-1000P-201ENST00000391066 ADRA2BP18089 450 aa20.79■□□□□ 0.92
RNU6-1000P-201ENST00000391066 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
RNU6-1000P-201ENST00000391066 MSH5O43196 834 aa19.83■□□□□ 0.77
RNU6-1000P-201ENST00000391066 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
RNU6-1000P-201ENST00000391066 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
RNU6-1000P-201ENST00000391066 KCNA4P22459 653 aa18.9■□□□□ 0.62
RNU6-1000P-201ENST00000391066 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
RNU6-1000P-201ENST00000391066 NCBP3Q53F19 620 aaKnown RBP18.76■□□□□ 0.59
RNU6-1000P-201ENST00000391066 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
RNU6-1000P-201ENST00000391066 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
RNU6-1000P-201ENST00000391066 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
RNU6-1000P-201ENST00000391066 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
RNU6-1000P-201ENST00000391066 HOXD11P31277 338 aaPredicted RBP18.23■□□□□ 0.51
RNU6-1000P-201ENST00000391066 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
RNU6-1000P-201ENST00000391066 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
RNU6-1000P-201ENST00000391066 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
RNU6-1000P-201ENST00000391066 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
RNU6-1000P-201ENST00000391066 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
RNU6-1000P-201ENST00000391066 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
RNU6-1000P-201ENST00000391066 ZBTB22O15209 634 aa17.4■□□□□ 0.38
RNU6-1000P-201ENST00000391066 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
RNU6-1000P-201ENST00000391066 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
RNU6-1000P-201ENST00000391066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
RNU6-1000P-201ENST00000391066 MYCNP04198 464 aaPredicted RBP17.08■□□□□ 0.32
RNU6-1000P-201ENST00000391066 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
RNU6-1000P-201ENST00000391066 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
RNU6-1000P-201ENST00000391066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
RNU6-1000P-201ENST00000391066 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
RNU6-1000P-201ENST00000391066 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
RNU6-1000P-201ENST00000391066 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
RNU6-1000P-201ENST00000391066 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.28
RNU6-1000P-201ENST00000391066 APLP2Q06481 763 aa16.68■□□□□ 0.26
RNU6-1000P-201ENST00000391066 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
RNU6-1000P-201ENST00000391066 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
RNU6-1000P-201ENST00000391066 CAPN15O75808 1086 aa16.49■□□□□ 0.23
RNU6-1000P-201ENST00000391066 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
RNU6-1000P-201ENST00000391066 TRHP20396 242 aaPredicted RBP16.44■□□□□ 0.22
RNU6-1000P-201ENST00000391066 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
RNU6-1000P-201ENST00000391066 DSG3P32926 999 aa16.22■□□□□ 0.19
RNU6-1000P-201ENST00000391066 POLA2Q14181 598 aa16.21■□□□□ 0.19
RNU6-1000P-201ENST00000391066 ABCB7O75027 752 aa16.18■□□□□ 0.18
RNU6-1000P-201ENST00000391066 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
RNU6-1000P-201ENST00000391066 MKRN4PQ13434 485 aaPredicted RBP15.92■□□□□ 0.14
RNU6-1000P-201ENST00000391066 FBLN2P98095 1184 aa15.9■□□□□ 0.14
RNU6-1000P-201ENST00000391066 FKBP8Q14318 412 aa15.66■□□□□ 0.1
RNU6-1000P-201ENST00000391066 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
RNU6-1000P-201ENST00000391066 SPDYE4A6NLX3 237 aa15.58■□□□□ 0.08
RNU6-1000P-201ENST00000391066 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
RNU6-1000P-201ENST00000391066 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
RNU6-1000P-201ENST00000391066 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
RNU6-1000P-201ENST00000391066 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
RNU6-1000P-201ENST00000391066 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
RNU6-1000P-201ENST00000391066 SSUH2Q9Y2M2 353 aa15.42■□□□□ 0.06
RNU6-1000P-201ENST00000391066 PROM2Q8N271 834 aa15.37■□□□□ 0.05
RNU6-1000P-201ENST00000391066 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
RNU6-1000P-201ENST00000391066 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
RNU6-1000P-201ENST00000391066 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
RNU6-1000P-201ENST00000391066 FBXO3Q9UK99 471 aa15.1■□□□□ 0.01
RNU6-1000P-201ENST00000391066 SPDYE1Q8NFV5 336 aaPredicted RBP15.04■□□□□ -0
RNU6-1000P-201ENST00000391066 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
RNU6-1000P-201ENST00000391066 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
RNU6-1000P-201ENST00000391066 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
RNU6-1000P-201ENST00000391066 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
RNU6-1000P-201ENST00000391066 PRR29P0C7W0 189 aa14.84□□□□□ -0.03
RNU6-1000P-201ENST00000391066 CHRDL2Q6WN34 429 aa14.76□□□□□ -0.05
RNU6-1000P-201ENST00000391066 MIER1Q8N108 512 aa14.76□□□□□ -0.05
RNU6-1000P-201ENST00000391066 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
RNU6-1000P-201ENST00000391066 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
RNU6-1000P-201ENST00000391066 CREBZFQ9NS37 354 aa14.69□□□□□ -0.06
RNU6-1000P-201ENST00000391066 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.06
RNU6-1000P-201ENST00000391066 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
RNU6-1000P-201ENST00000391066 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
RNU6-1000P-201ENST00000391066 KLHL34Q8N239 644 aa14.6□□□□□ -0.07
RNU6-1000P-201ENST00000391066 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
RNU6-1000P-201ENST00000391066 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
RNU6-1000P-201ENST00000391066 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
RNU6-1000P-201ENST00000391066 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
RNU6-1000P-201ENST00000391066 SPOCK2Q92563 424 aa14.51□□□□□ -0.09
RNU6-1000P-201ENST00000391066 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
RNU6-1000P-201ENST00000391066 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
RNU6-1000P-201ENST00000391066 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
RNU6-1000P-201ENST00000391066 NUBP1P53384 320 aa14.4□□□□□ -0.1
RNU6-1000P-201ENST00000391066 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
RNU6-1000P-201ENST00000391066 RASEFQ8IZ41 740 aa14.31□□□□□ -0.12
RNU6-1000P-201ENST00000391066 PKD2Q13563 968 aa14.25□□□□□ -0.13
RNU6-1000P-201ENST00000391066 GSE1Q14687 1217 aa14.25□□□□□ -0.13
RNU6-1000P-201ENST00000391066 DCAF8Q5TAQ9 597 aa14.25□□□□□ -0.13
RNU6-1000P-201ENST00000391066 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
RNU6-1000P-201ENST00000391066 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
RNU6-1000P-201ENST00000391066 POTEHQ6S545 545 aa14.21□□□□□ -0.13
RNU6-1000P-201ENST00000391066 TSPYL2Q9H2G4 693 aaPredicted RBP14.19□□□□□ -0.14
RNU6-1000P-201ENST00000391066 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
RNU6-1000P-201ENST00000391066 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms