Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDX1P47902 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CDX1P47902 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.36□□□□□ -1.55
CDX1P47902 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.36□□□□□ -1.55
CDX1P47902 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDX1P47902 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 AC004023.1-201ENST00000561473 1744 ntBASIC5.35□□□□□ -1.55
CDX1P47902 OR10AB1P-202ENST00000641219 1686 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AC095038.1-201ENST00000429248 1591 ntBASIC5.35□□□□□ -1.55
CDX1P47902 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.35□□□□□ -1.55
CDX1P47902 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDX1P47902 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 MIR133A2-201ENST00000347538 102 ntBASIC5.35□□□□□ -1.55
CDX1P47902 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDX1P47902 RN7SKP184-201ENST00000362348 333 ntBASIC5.35□□□□□ -1.55
CDX1P47902 SNORD8-201ENST00000363915 110 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RNU6-670P-201ENST00000364312 104 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RN7SKP191-201ENST00000364713 306 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RN7SKP130-201ENST00000364924 301 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RN7SKP47-201ENST00000365347 328 ntBASIC5.35□□□□□ -1.55
CDX1P47902 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 LCN1P2-201ENST00000372030 223 ntBASIC5.35□□□□□ -1.55
CDX1P47902 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDX1P47902 PEX12P1-201ENST00000400284 1048 ntBASIC5.35□□□□□ -1.55
CDX1P47902 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 TRIM60P17-201ENST00000415181 719 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 AHCYP8-201ENST00000425108 209 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AP003385.1-201ENST00000426387 893 ntBASIC5.35□□□□□ -1.55
CDX1P47902 MTCO1P51-201ENST00000427672 1060 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AL022324.2-201ENST00000434827 780 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RPL7AP71-201ENST00000451120 739 ntBASIC5.35□□□□□ -1.55
CDX1P47902 NPM1P9-201ENST00000453156 844 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RPL31P11-202ENST00000454082 372 ntBASIC5.35□□□□□ -1.55
CDX1P47902 PSMA6P2-201ENST00000457574 686 ntBASIC5.35□□□□□ -1.55
CDX1P47902 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 AC022336.1-201ENST00000475510 337 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RPS7P11-201ENST00000484240 586 ntBASIC5.35□□□□□ -1.55
CDX1P47902 OR9N1P-201ENST00000491296 333 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RN7SL612P-201ENST00000497704 295 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.35□□□□□ -1.55
CDX1P47902 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 AC093878.1-201ENST00000515630 432 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RNU6-319P-201ENST00000516025 108 ntBASIC5.35□□□□□ -1.55
CDX1P47902 SEC11B-201ENST00000518383 499 ntBASIC5.35□□□□□ -1.55
CDX1P47902 EEF1B2P2-201ENST00000519625 676 ntBASIC5.35□□□□□ -1.55
CDX1P47902 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 CHEK2P2-201ENST00000554701 672 ntBASIC5.35□□□□□ -1.55
CDX1P47902 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 GTF2IP6-201ENST00000583143 541 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
CDX1P47902 LSM1P2-201ENST00000604911 322 ntBASIC5.35□□□□□ -1.55
CDX1P47902 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.35□□□□□ -1.55
CDX1P47902 AL139254.3-201ENST00000641097 674 ntBASIC5.35□□□□□ -1.55
CDX1P47902 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDX1P47902 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDX1P47902 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.35□□□□□ -1.55
CDX1P47902 AC005332.9-201ENST00000620266 2921 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms