Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTX3P26022 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.68□□□□□ -1.34
PTX3P26022 WBP11P1-201ENST00000562560 1931 ntBASIC6.68□□□□□ -1.34
PTX3P26022 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.68□□□□□ -1.34
PTX3P26022 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 ZNF658B-201ENST00000602828 3408 ntBASIC6.67□□□□□ -1.34
PTX3P26022 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 AC093909.5-201ENST00000621839 1799 ntBASIC6.67□□□□□ -1.34
PTX3P26022 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 NAMPTP1-201ENST00000440465 2514 ntBASIC6.67□□□□□ -1.34
PTX3P26022 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PTX3P26022 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 RNU6-252P-201ENST00000363232 107 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RNA5SP114-201ENST00000363780 113 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RNU12-2P-201ENST00000364789 156 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RNU6-481P-201ENST00000384194 107 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RNA5SP53-201ENST00000391299 120 ntBASIC6.67□□□□□ -1.34
PTX3P26022 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.67□□□□□ -1.34
PTX3P26022 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 VN1R25P-201ENST00000443385 738 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.67□□□□□ -1.34
PTX3P26022 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 PSMA6P2-201ENST00000457574 686 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 RPSAP48-201ENST00000466509 889 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RPSAP39-201ENST00000467439 883 ntBASIC6.67□□□□□ -1.34
PTX3P26022 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 RN7SL563P-201ENST00000481233 298 ntBASIC6.67□□□□□ -1.34
PTX3P26022 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 AC010374.1-201ENST00000503762 1237 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC106760.2-201ENST00000504159 619 ntBASIC6.67□□□□□ -1.34
PTX3P26022 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.67□□□□□ -1.34
PTX3P26022 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.67□□□□□ -1.34
PTX3P26022 IGLVV-66-201ENST00000523818 341 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 AP000916.1-201ENST00000533869 835 ntBASIC6.67□□□□□ -1.34
PTX3P26022 OR4U1P-201ENST00000554958 912 ntBASIC6.67□□□□□ -1.34
PTX3P26022 FXNP1-201ENST00000555153 337 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 AC008536.1-201ENST00000602872 669 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC073137.1-201ENST00000605636 634 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 AL161931.1-201ENST00000612768 246 ntBASIC6.67□□□□□ -1.34
PTX3P26022 RN7SL126P-201ENST00000616400 299 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AL161420.1-201ENST00000619393 264 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC011330.2-201ENST00000621680 635 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AC073862.4-201ENST00000622982 854 ntBASIC6.67□□□□□ -1.34
PTX3P26022 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 CDY19P-201ENST00000411668 1613 ntBASIC6.67□□□□□ -1.34
PTX3P26022 CDY18P-201ENST00000438294 1609 ntBASIC6.67□□□□□ -1.34
PTX3P26022 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PTX3P26022 MAPK10-365ENST00000641902 3825 ntBASIC6.67□□□□□ -1.34
PTX3P26022 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.67□□□□□ -1.34
PTX3P26022 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
PTX3P26022 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
PTX3P26022 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PTX3P26022 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.66□□□□□ -1.34
PTX3P26022 AC007406.5-201ENST00000570140 3170 ntBASIC6.66□□□□□ -1.34
PTX3P26022 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.66□□□□□ -1.34
PTX3P26022 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTX3P26022 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTX3P26022 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTX3P26022 RN7SKP47-201ENST00000365347 328 ntBASIC6.66□□□□□ -1.34
PTX3P26022 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.66□□□□□ -1.34
PTX3P26022 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTX3P26022 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.66□□□□□ -1.34
PTX3P26022 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PTX3P26022 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.66□□□□□ -1.34
PTX3P26022 RNU6-796P-201ENST00000391086 107 ntBASIC6.66□□□□□ -1.34
PTX3P26022 AL049545.1-201ENST00000401856 572 ntBASIC6.66□□□□□ -1.34
PTX3P26022 RPL10P10-201ENST00000403509 664 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms