Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
RFX1P22670 AP000776.1-201ENST00000530032 1663 ntBASIC8.3□□□□□ -1.08
RFX1P22670 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 AC092104.1-201ENST00000497346 1441 ntBASIC8.3□□□□□ -1.08
RFX1P22670 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AC092646.2-201ENST00000431242 2095 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC245505.2-201ENST00000553572 3055 ntBASIC8.3□□□□□ -1.08
RFX1P22670 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
RFX1P22670 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AC023490.2-201ENST00000359859 470 ntBASIC8.3□□□□□ -1.08
RFX1P22670 MT-TP-201ENST00000387461 68 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC004022.2-201ENST00000413824 193 ntBASIC8.3□□□□□ -1.08
RFX1P22670 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 AC009784.1-201ENST00000426484 460 ntBASIC8.3□□□□□ -1.08
RFX1P22670 NANOGP4-201ENST00000427230 913 ntBASIC8.3□□□□□ -1.08
RFX1P22670 C8orf59P1-201ENST00000429930 303 ntBASIC8.3□□□□□ -1.08
RFX1P22670 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AL590682.1-201ENST00000437248 344 ntBASIC8.3□□□□□ -1.08
RFX1P22670 MTCYBP39-201ENST00000437562 491 ntBASIC8.3□□□□□ -1.08
RFX1P22670 CYP2C56P-201ENST00000440076 291 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 ARMC8P1-201ENST00000443069 1289 ntBASIC8.3□□□□□ -1.08
RFX1P22670 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.3□□□□□ -1.08
RFX1P22670 TPMTP4-201ENST00000450749 678 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.3□□□□□ -1.08
RFX1P22670 CDH12P2-201ENST00000504393 298 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC022296.2-201ENST00000512424 202 ntBASIC8.3□□□□□ -1.08
RFX1P22670 OR5H7P-201ENST00000514084 930 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 AC060788.1-201ENST00000521318 469 ntBASIC8.3□□□□□ -1.08
RFX1P22670 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 AL049869.4-201ENST00000555669 178 ntBASIC8.3□□□□□ -1.08
RFX1P22670 CASC16-202ENST00000563844 610 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 AC016629.2-201ENST00000597341 199 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AL589765.6-201ENST00000601909 549 ntBASIC8.3□□□□□ -1.08
RFX1P22670 MARK3P1-201ENST00000604796 643 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC100767.2-201ENST00000604840 693 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AL158063.1-201ENST00000615349 536 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC022509.4-201ENST00000621404 572 ntBASIC8.3□□□□□ -1.08
RFX1P22670 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AF246928.1-201ENST00000623768 87 ntBASIC8.3□□□□□ -1.08
RFX1P22670 HBG1-202ENST00000632727 369 ntTSL 3 BASIC8.3□□□□□ -1.08
RFX1P22670 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 AC087821.2-201ENST00000637086 450 ntBASIC8.3□□□□□ -1.08
RFX1P22670 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RFX1P22670 AC138393.1-206ENST00000540997 1886 ntBASIC8.3□□□□□ -1.08
RFX1P22670 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.3□□□□□ -1.08
RFX1P22670 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.3□□□□□ -1.08
RFX1P22670 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.3□□□□□ -1.08
RFX1P22670 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 AC011503.2-201ENST00000594230 1500 ntBASIC8.29□□□□□ -1.08
RFX1P22670 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RFX1P22670 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.29□□□□□ -1.08
RFX1P22670 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.29□□□□□ -1.08
RFX1P22670 AL035419.1-201ENST00000397037 564 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms