Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.29□□□□□ -1.4
RIPK2O43353 NIFKP4-201ENST00000567275 1192 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AC133552.4-201ENST00000576103 676 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.29□□□□□ -1.4
RIPK2O43353 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.29□□□□□ -1.4
RIPK2O43353 RPL29P33-201ENST00000587474 316 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.29□□□□□ -1.4
RIPK2O43353 DYNLL1P1-201ENST00000595442 269 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.29□□□□□ -1.4
RIPK2O43353 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AL031658.2-201ENST00000616850 651 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AL137067.2-201ENST00000621202 131 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.29□□□□□ -1.4
RIPK2O43353 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
RIPK2O43353 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.29□□□□□ -1.4
RIPK2O43353 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 DDX18P6-201ENST00000450119 1997 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 AC140134.1-201ENST00000511830 3544 ntBASIC6.29□□□□□ -1.4
RIPK2O43353 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIPK2O43353 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.28□□□□□ -1.4
RIPK2O43353 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.28□□□□□ -1.4
RIPK2O43353 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RIPK2O43353 SNORA77.2-201ENST00000408571 112 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL353803.3-201ENST00000444641 335 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 AL162739.1-201ENST00000450606 307 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 TRBV5-2-201ENST00000489095 273 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 AC010409.2-201ENST00000505780 478 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 MRPL57P6-201ENST00000506570 309 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 ST13P12-201ENST00000508958 1094 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.28□□□□□ -1.4
RIPK2O43353 RNU4ATAC-201ENST00000580972 127 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC024085.1-201ENST00000604299 432 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.28□□□□□ -1.4
RIPK2O43353 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIPK2O43353 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.28□□□□□ -1.4
RIPK2O43353 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
RIPK2O43353 AC138907.8-201ENST00000623981 2256 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 LINC01808-203ENST00000641932 1643 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 NAMPTP1-201ENST00000440465 2514 ntBASIC6.28□□□□□ -1.4
RIPK2O43353 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.27□□□□□ -1.4
RIPK2O43353 QRSL1P3-201ENST00000552666 1316 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
RIPK2O43353 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK2O43353 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 AL049869.1-201ENST00000556933 1402 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RIPK2O43353 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.27□□□□□ -1.41
RIPK2O43353 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
RIPK2O43353 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
RIPK2O43353 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
RIPK2O43353 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RIPK2O43353 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
RIPK2O43353 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.27□□□□□ -1.41
RIPK2O43353 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.27□□□□□ -1.41
RIPK2O43353 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.27□□□□□ -1.41
RIPK2O43353 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK2O43353 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK2O43353 E2F6P1-201ENST00000428850 745 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 RPL3P11-201ENST00000434028 1146 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 E2F6P3-201ENST00000441743 743 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RIPK2O43353 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
RIPK2O43353 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.27□□□□□ -1.41
RIPK2O43353 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
RIPK2O43353 AC018645.1-201ENST00000505003 109 ntBASIC6.27□□□□□ -1.41
RIPK2O43353 AC093815.1-201ENST00000508637 280 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms