Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.2□□□□□ -1.42
BRF2Q9HAW0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRF2Q9HAW0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
BRF2Q9HAW0 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRF2Q9HAW0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.2□□□□□ -1.42
BRF2Q9HAW0 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 SNORA70H-201ENST00000383910 135 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 SNORA70J-201ENST00000384182 135 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 U3.43-201ENST00000410734 213 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 RN7SKP161-201ENST00000411110 305 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 MTND2P12-201ENST00000417560 1252 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 NDUFA5P1-201ENST00000433858 341 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 TPRKBP1-201ENST00000456243 481 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC022336.1-201ENST00000475510 337 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 RFPL4AP3-201ENST00000515267 345 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL121579.2-201ENST00000555466 590 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC092718.4-201ENST00000566639 716 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 RN7SL32P-201ENST00000580514 281 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 RPL29P33-201ENST00000587474 316 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC004805.3-201ENST00000603178 310 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AC084036.1-201ENST00000609190 508 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 MIR6085-201ENST00000618314 110 ntBASIC6.19□□□□□ -1.42
BRF2Q9HAW0 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRF2Q9HAW0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AC011369.2-201ENST00000624423 1567 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 OR51C1P-202ENST00000641159 1444 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 MIR431-201ENST00000385266 114 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 KIF4CP-201ENST00000422742 1279 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AC007568.1-201ENST00000422912 471 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 COL11A2P1-205ENST00000441798 676 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AL020997.1-201ENST00000446554 349 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.18□□□□□ -1.42
BRF2Q9HAW0 RN7SL165P-201ENST00000477476 291 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 RN7SL655P-201ENST00000486087 298 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 AL079303.1-201ENST00000486611 463 ntBASIC6.18□□□□□ -1.42
BRF2Q9HAW0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms