Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 VN1R81P-201ENST00000602085 372 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AP005131.7-201ENST00000610087 611 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC003001.2-201ENST00000616294 831 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC005393.1-201ENST00000617916 584 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AL512652.1-201ENST00000619006 500 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AP003400.6-201ENST00000624698 740 ntBASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.78□□□□□ -1.16
RTFDC1Q9BY42 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RTFDC1Q9BY42 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RTFDC1Q9BY42 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
RTFDC1Q9BY42 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
RTFDC1Q9BY42 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC139426.3-201ENST00000605648 2059 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 RN7SKP121-201ENST00000410842 305 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 RN7SKP144-201ENST00000411108 279 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC007064.3-201ENST00000422608 359 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC017099.1-201ENST00000448261 1028 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC089999.1-201ENST00000460336 374 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 RN7SL177P-201ENST00000476596 299 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC022206.1-201ENST00000495947 347 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 ATG10-AS1-201ENST00000504846 648 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AL133445.2-201ENST00000611191 527 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AC073575.2-201ENST00000614212 627 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 AP000720.1-201ENST00000625091 483 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 HYDIN2-203ENST00000614586 13885 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
RTFDC1Q9BY42 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 SNORA21-201ENST00000362423 132 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 MIR541-201ENST00000401360 84 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC016769.2-201ENST00000414815 475 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 NPM1P25-201ENST00000429734 854 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 MTCO1P57-201ENST00000432182 261 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 LYPLA1P1-201ENST00000434514 622 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 NPM1P19-201ENST00000450070 712 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AL356390.1-201ENST00000455684 397 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 RN7SL714P-201ENST00000487050 298 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC090022.1-201ENST00000546569 311 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 RPA2P1-201ENST00000556557 721 ntBASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.76□□□□□ -1.17
RTFDC1Q9BY42 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 329.1 ms