Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC010894.1-201ENST00000313760 361 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AL139039.2-201ENST00000407436 479 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 CYCSP52-201ENST00000422857 310 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AL451136.1-201ENST00000435399 325 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AL356390.1-201ENST00000455684 397 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 ATG10-AS1-201ENST00000504846 648 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 GUSBP9-201ENST00000510138 584 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AL390198.2-201ENST00000510553 222 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC093816.1-201ENST00000515076 913 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 IGHV1-14-201ENST00000523391 241 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 RAB28P4-201ENST00000622233 665 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 AC020763.5-201ENST00000623298 430 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 CASC19-228ENST00000641414 1684 ntBASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
CHMP4CQ96CF2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 NCOA4P2-201ENST00000340589 1813 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 OR51C1P-202ENST00000641159 1444 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC107977.1-201ENST00000355745 939 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 RNA5SP321-201ENST00000362722 111 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 SETP10-201ENST00000424368 814 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 GAPDHP37-201ENST00000442317 968 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC073072.2-201ENST00000447425 348 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 TVP23CP1-201ENST00000450317 639 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 C1DP3-201ENST00000455013 423 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 MARK2P8-201ENST00000476069 952 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC098818.1-201ENST00000478593 252 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 RNU6-943P-201ENST00000516960 98 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 PVT1-214ENST00000522875 922 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AP003115.1-201ENST00000569849 463 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AC005277.2-201ENST00000617898 390 ntBASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.8□□□□□ -1.16
CHMP4CQ96CF2 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms