Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 RARSP1-201ENST00000542842 1418 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CDY8P-201ENST00000428380 1279 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC003989.1-201ENST00000434569 565 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CDY20P-201ENST00000447528 1279 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 RN7SL834P-201ENST00000461450 286 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 RN7SL104P-201ENST00000498686 293 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC131392.1-201ENST00000506490 633 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC002456.2-201ENST00000509356 380 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC122713.1-201ENST00000518368 1015 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC016144.1-201ENST00000548175 1087 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC005277.2-201ENST00000617898 390 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 FAM27E2-201ENST00000619668 403 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 MTCO1P1-201ENST00000624263 1081 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AL354854.1-201ENST00000455940 1363 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC091305.2-201ENST00000624049 1576 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 MROH3P-201ENST00000435735 2676 ntBASIC7.03□□□□□ -1.28
HERC6Q8IVU3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
HERC6Q8IVU3 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
HERC6Q8IVU3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.02□□□□□ -1.28
HERC6Q8IVU3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.02□□□□□ -1.28
HERC6Q8IVU3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AL049634.1-201ENST00000453770 1720 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RNU4-23P-201ENST00000362839 140 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 SUGT1P2-201ENST00000379452 992 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC087752.1-201ENST00000391360 558 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RN7SKP271-201ENST00000410528 320 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RN7SKP144-201ENST00000411108 279 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 NPM1P36-201ENST00000415681 835 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 CRYGGP-201ENST00000443337 145 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 RNU7-157P-201ENST00000459600 66 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 HMGN1P8-201ENST00000463578 288 ntBASIC7.02□□□□□ -1.29
HERC6Q8IVU3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
HERC6Q8IVU3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms