Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 AC018992.1-201ENST00000523778 2149 ntBASIC7.61□□□□□ -1.19
SOX4Q06945 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.61□□□□□ -1.19
SOX4Q06945 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.61□□□□□ -1.19
SOX4Q06945 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SOX4Q06945 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SOX4Q06945 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SOX4Q06945 SNORD113-6-201ENST00000363345 75 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 RN7SKP118-201ENST00000364331 330 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC7.6□□□□□ -1.19
SOX4Q06945 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SOX4Q06945 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.6□□□□□ -1.19
SOX4Q06945 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SOX4Q06945 RN7SKP148-201ENST00000410179 275 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 MTND1P23-201ENST00000416931 372 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 NPM1P26-201ENST00000426339 738 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 RPL7P45-201ENST00000455851 743 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX4Q06945 RPL6P9-201ENST00000466502 859 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC015864.1-201ENST00000496512 544 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 SCARNA6-201ENST00000515982 265 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC004923.2-201ENST00000529649 369 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 AC005000.1-201ENST00000536192 288 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.6□□□□□ -1.19
SOX4Q06945 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 VN1R88P-201ENST00000596787 292 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 AC017083.3-201ENST00000609955 700 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
SOX4Q06945 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SOX4Q06945 TPTE2P2-201ENST00000403471 1466 ntBASIC7.6□□□□□ -1.19
SOX4Q06945 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
SOX4Q06945 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.6□□□□□ -1.19
SOX4Q06945 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
SOX4Q06945 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SOX4Q06945 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 RNU4-92P-201ENST00000363783 136 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 OR13C3-201ENST00000374781 1108 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AL136310.1-201ENST00000404926 654 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC006366.1-201ENST00000422002 759 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 MTCO1P43-201ENST00000431831 488 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 RPL6P5-201ENST00000445678 828 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 PTENP1-201ENST00000447117 1215 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC073476.1-201ENST00000452854 407 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AL133477.1-201ENST00000457472 514 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 BX323845.2-201ENST00000458382 234 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms