Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NPM1P25-201ENST00000429734 854 ntBASIC6.44□□□□□ -1.38
CDH4P55283 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH4P55283 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH4P55283 AC068491.1-201ENST00000449539 1241 ntBASIC6.44□□□□□ -1.38
CDH4P55283 HMGB1P7-201ENST00000450921 612 ntBASIC6.44□□□□□ -1.38
CDH4P55283 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
CDH4P55283 RANP2-201ENST00000456833 229 ntBASIC6.44□□□□□ -1.38
CDH4P55283 AC104339.1-201ENST00000465478 348 ntBASIC6.44□□□□□ -1.38
CDH4P55283 RPL12P30-201ENST00000488389 499 ntBASIC6.44□□□□□ -1.38
CDH4P55283 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.44□□□□□ -1.38
CDH4P55283 OR51A1P-201ENST00000511110 946 ntBASIC6.44□□□□□ -1.38
CDH4P55283 MAST4-IT1-201ENST00000514241 658 ntBASIC6.44□□□□□ -1.38
CDH4P55283 RNA5SP473-201ENST00000516402 125 ntBASIC6.44□□□□□ -1.38
CDH4P55283 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH4P55283 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH4P55283 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 DYNLL1P1-201ENST00000595442 269 ntBASIC6.44□□□□□ -1.38
CDH4P55283 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 CYCSP1-201ENST00000604815 315 ntBASIC6.44□□□□□ -1.38
CDH4P55283 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.44□□□□□ -1.38
CDH4P55283 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 AC110373.1-201ENST00000505994 3505 ntBASIC6.44□□□□□ -1.38
CDH4P55283 BIN2P1-201ENST00000504996 1530 ntBASIC6.44□□□□□ -1.38
CDH4P55283 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH4P55283 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH4P55283 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH4P55283 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH4P55283 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CDH4P55283 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH4P55283 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 AL133243.2-201ENST00000610331 1621 ntBASIC6.43□□□□□ -1.38
CDH4P55283 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 ZNF658B-201ENST00000602828 3408 ntBASIC6.43□□□□□ -1.38
CDH4P55283 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH4P55283 AC107977.1-201ENST00000355745 939 ntBASIC6.43□□□□□ -1.38
CDH4P55283 RNU1-49P-201ENST00000363468 159 ntBASIC6.43□□□□□ -1.38
CDH4P55283 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH4P55283 RN7SKP108-201ENST00000411367 328 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH4P55283 RPSAP65-201ENST00000429660 595 ntBASIC6.43□□□□□ -1.38
CDH4P55283 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.43□□□□□ -1.38
CDH4P55283 PPIAP10-201ENST00000438675 458 ntBASIC6.43□□□□□ -1.38
CDH4P55283 RPL5P7-201ENST00000444235 813 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AC010240.2-201ENST00000445363 1205 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AL590004.3-202ENST00000445883 451 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 CTSLP6-201ENST00000458273 1002 ntBASIC6.43□□□□□ -1.38
CDH4P55283 MTND6P8-201ENST00000503471 522 ntBASIC6.43□□□□□ -1.38
CDH4P55283 SNX18P24-201ENST00000505249 671 ntBASIC6.43□□□□□ -1.38
CDH4P55283 HSD3BP3-201ENST00000514706 994 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AP005639.1-201ENST00000526939 192 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AP001858.2-201ENST00000536213 601 ntBASIC6.43□□□□□ -1.38
CDH4P55283 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH4P55283 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.43□□□□□ -1.38
CDH4P55283 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.43□□□□□ -1.38
CDH4P55283 AP005136.2-201ENST00000583253 1049 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AL513218.1-201ENST00000606527 391 ntBASIC6.43□□□□□ -1.38
CDH4P55283 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AL080312.2-201ENST00000613001 630 ntBASIC6.43□□□□□ -1.38
CDH4P55283 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 AC011369.2-201ENST00000624423 1567 ntBASIC6.43□□□□□ -1.38
CDH4P55283 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH4P55283 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH4P55283 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 AC119674.1-213ENST00000641177 1386 ntBASIC6.43□□□□□ -1.38
CDH4P55283 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH4P55283 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH4P55283 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms