Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TOP2AP11388 AC092821.3-202ENST00000641304 2767 ntBASIC10.56□□□□□ -0.72
TOP2AP11388 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC10.56□□□□□ -0.72
TOP2AP11388 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC10.56□□□□□ -0.72
TOP2AP11388 CUBNP2-201ENST00000443534 1139 ntBASIC10.56□□□□□ -0.72
TOP2AP11388 GAPDHP71-201ENST00000511530 1003 ntBASIC10.56□□□□□ -0.72
TOP2AP11388 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC10.56□□□□□ -0.72
TOP2AP11388 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.56□□□□□ -0.72
TOP2AP11388 OR7A1P-201ENST00000601206 970 ntBASIC10.56□□□□□ -0.72
TOP2AP11388 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC10.56□□□□□ -0.72
TOP2AP11388 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TOP2AP11388 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
TOP2AP11388 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC10.55□□□□□ -0.72
TOP2AP11388 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.55□□□□□ -0.72
TOP2AP11388 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC10.55□□□□□ -0.72
TOP2AP11388 OR7E157P-201ENST00000494376 911 ntBASIC10.55□□□□□ -0.72
TOP2AP11388 OR56A7P-201ENST00000524865 941 ntBASIC10.55□□□□□ -0.72
TOP2AP11388 AP005639.1-201ENST00000526939 192 ntBASIC10.55□□□□□ -0.72
TOP2AP11388 WDR75-207ENST00000631047 270 ntTSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 AL590763.1-201ENST00000398297 1545 ntBASIC10.55□□□□□ -0.72
TOP2AP11388 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TOP2AP11388 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TOP2AP11388 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
TOP2AP11388 AC096921.2-201ENST00000561507 1916 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
TOP2AP11388 RN7SKP166-201ENST00000410812 305 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 AL662874.1-201ENST00000426065 230 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.54□□□□□ -0.72
TOP2AP11388 PTMAP6-201ENST00000439110 327 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 AC108693.1-201ENST00000496068 432 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.54□□□□□ -0.72
TOP2AP11388 GMFG-212ENST00000602185 423 ntTSL 3 BASIC10.54□□□□□ -0.72
TOP2AP11388 FAM27E4-201ENST00000605259 342 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC10.54□□□□□ -0.72
TOP2AP11388 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TOP2AP11388 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
TOP2AP11388 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC10.54□□□□□ -0.72
TOP2AP11388 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TOP2AP11388 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
TOP2AP11388 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
TOP2AP11388 AC241584.2-201ENST00000637142 2090 ntBASIC10.54□□□□□ -0.72
TOP2AP11388 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
TOP2AP11388 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TOP2AP11388 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TOP2AP11388 NCOA4P3-201ENST00000513203 1877 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC10.53□□□□□ -0.72
TOP2AP11388 RNU1-24P-201ENST00000364285 165 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC10.53□□□□□ -0.72
TOP2AP11388 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 SNRPEP6-201ENST00000407465 277 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 CYCSP51-201ENST00000443545 318 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 SDC4P-201ENST00000453285 601 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AL133445.1-201ENST00000467051 452 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 SIAH1P1-201ENST00000479411 923 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 EIF3LP3-201ENST00000495197 822 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AC002456.2-201ENST00000509356 380 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 TXNP4-201ENST00000575018 310 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 FO393422.1-201ENST00000603908 708 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 HOTTIP_3.1-201ENST00000619957 337 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 AL359976.1-201ENST00000418655 3528 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC10.53□□□□□ -0.72
TOP2AP11388 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 PABPC1P6-201ENST00000445594 1829 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TOP2AP11388 AC016583.1-201ENST00000624221 2431 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AC009166.2-201ENST00000624410 2833 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
TOP2AP11388 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
TOP2AP11388 PTCD2P2-201ENST00000415579 1095 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AC007386.1-201ENST00000455212 582 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC10.53□□□□□ -0.72
TOP2AP11388 RNU6-615P-201ENST00000516065 106 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC10.53□□□□□ -0.72
TOP2AP11388 uc_338.26-201ENST00000612659 160 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 AL035661.1-201ENST00000620459 1144 ntBASIC10.53□□□□□ -0.72
TOP2AP11388 OR11H2-202ENST00000641517 1085 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms