Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MTND6P8-201ENST00000503471 522 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 PRMT5P1-201ENST00000514351 598 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 CYCSP38-201ENST00000559840 322 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC092332.1-201ENST00000563684 829 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 MIR5095-201ENST00000578844 88 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC008507.3-201ENST00000585753 472 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 ADAD1P2-201ENST00000588476 646 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 OR7A11P-201ENST00000597719 953 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC007423.1-201ENST00000605009 627 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC097467.4-201ENST00000605504 141 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AL008723.3-201ENST00000608926 449 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AP003072.5-201ENST00000623872 773 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC130448.2-201ENST00000624082 374 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 OR5T3-201ENST00000303059 1023 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 SNORA51.9-201ENST00000384295 124 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AP000949.1-201ENST00000438328 629 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 DNAJA1P5-201ENST00000440278 943 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 PPIAP7-201ENST00000454070 489 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RPL12P24-201ENST00000474907 486 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 LSM3P4-201ENST00000502948 309 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AP000620.1-201ENST00000527147 504 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 SCARNA9-201ENST00000530422 353 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC090826.1-203ENST00000569235 490 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RPAP2P1-201ENST00000603626 1168 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AL365181.4-201ENST00000609800 547 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC010998.3-201ENST00000613871 631 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC003001.2-201ENST00000616294 831 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 AC008147.4-201ENST00000617570 1204 ntBASIC7.47□□□□□ -1.21
HLA-DOAP06340 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
HLA-DOAP06340 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.47□□□□□ -1.21
HLA-DOAP06340 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
HLA-DOAP06340 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-DOAP06340 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.46□□□□□ -1.21
HLA-DOAP06340 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.46□□□□□ -1.21
HLA-DOAP06340 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-DOAP06340 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
HLA-DOAP06340 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC130360.1-201ENST00000425489 1117 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 RPS7P14-201ENST00000426405 583 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC007386.1-201ENST00000455212 582 ntBASIC7.46□□□□□ -1.22
HLA-DOAP06340 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
HLA-DOAP06340 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms