Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TNFP01375 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 SNORA21-201ENST00000362423 132 ntBASIC6.12□□□□□ -1.43
TNFP01375 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.12□□□□□ -1.43
TNFP01375 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 RNA5SP156-201ENST00000410250 110 ntBASIC6.12□□□□□ -1.43
TNFP01375 UBE2V1P14-201ENST00000415815 558 ntBASIC6.12□□□□□ -1.43
TNFP01375 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.12□□□□□ -1.43
TNFP01375 DNAJA1P5-201ENST00000440278 943 ntBASIC6.12□□□□□ -1.43
TNFP01375 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.12□□□□□ -1.43
TNFP01375 AL354854.1-201ENST00000455940 1363 ntBASIC6.12□□□□□ -1.43
TNFP01375 AC018717.1-201ENST00000457712 1505 ntBASIC6.12□□□□□ -1.43
TNFP01375 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.12□□□□□ -1.43
TNFP01375 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 IGKV3D-25-201ENST00000519599 235 ntBASIC6.12□□□□□ -1.43
TNFP01375 GUCY1B2-204ENST00000531898 1979 ntBASIC6.12□□□□□ -1.43
TNFP01375 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.12□□□□□ -1.43
TNFP01375 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.12□□□□□ -1.43
TNFP01375 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.12□□□□□ -1.43
TNFP01375 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.12□□□□□ -1.43
TNFP01375 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.12□□□□□ -1.43
TNFP01375 AC024651.2-201ENST00000562480 2098 ntBASIC6.12□□□□□ -1.43
TNFP01375 AC022819.1-201ENST00000563495 3910 ntBASIC6.12□□□□□ -1.43
TNFP01375 MTCO1P28-201ENST00000574177 1528 ntBASIC6.12□□□□□ -1.43
TNFP01375 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.12□□□□□ -1.43
TNFP01375 AL512652.1-201ENST00000619006 500 ntBASIC6.12□□□□□ -1.43
TNFP01375 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.12□□□□□ -1.43
TNFP01375 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 MAPK10-323ENST00000641493 3207 ntBASIC6.12□□□□□ -1.43
TNFP01375 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.12□□□□□ -1.43
TNFP01375 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TNFP01375 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
TNFP01375 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.11□□□□□ -1.43
TNFP01375 AL133243.4-201ENST00000623116 3109 ntBASIC6.11□□□□□ -1.43
TNFP01375 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TNFP01375 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TNFP01375 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 RPS7P8-201ENST00000418311 581 ntBASIC6.11□□□□□ -1.43
TNFP01375 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 AC023141.3-201ENST00000436698 278 ntBASIC6.11□□□□□ -1.43
TNFP01375 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 AC073916.1-201ENST00000545095 130 ntBASIC6.11□□□□□ -1.43
TNFP01375 AC079905.1-201ENST00000549280 475 ntBASIC6.11□□□□□ -1.43
TNFP01375 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.11□□□□□ -1.43
TNFP01375 AC233702.7-202ENST00000582941 211 ntBASIC6.11□□□□□ -1.43
TNFP01375 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.11□□□□□ -1.43
TNFP01375 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.11□□□□□ -1.43
TNFP01375 OR7A1P-201ENST00000601206 970 ntBASIC6.11□□□□□ -1.43
TNFP01375 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 AC024255.1-201ENST00000614376 102 ntBASIC6.11□□□□□ -1.43
TNFP01375 AL450226.2-201ENST00000622913 439 ntBASIC6.11□□□□□ -1.43
TNFP01375 AC012254.5-201ENST00000623573 478 ntBASIC6.11□□□□□ -1.43
TNFP01375 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
TNFP01375 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TNFP01375 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
TNFP01375 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TNFP01375 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TNFP01375 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.1□□□□□ -1.43
TNFP01375 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TNFP01375 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms