Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.71□□□□□ -1.17
SOX1O00570 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.71□□□□□ -1.17
SOX1O00570 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.71□□□□□ -1.17
SOX1O00570 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.71□□□□□ -1.17
SOX1O00570 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SOX1O00570 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 RNU4-4P-201ENST00000364588 130 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RNU6-867P-201ENST00000364956 107 ntBASIC7.71□□□□□ -1.18
SOX1O00570 MIR152-201ENST00000385212 87 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RNU6-796P-201ENST00000391086 107 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RPL7P27-201ENST00000403775 720 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RN7SKP129-201ENST00000410288 299 ntBASIC7.71□□□□□ -1.18
SOX1O00570 BX510359.3-201ENST00000422168 306 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 AC011233.1-201ENST00000422812 283 ntBASIC7.71□□□□□ -1.18
SOX1O00570 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 AC000041.1-201ENST00000439655 175 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 TAF9P1-201ENST00000445421 515 ntBASIC7.71□□□□□ -1.18
SOX1O00570 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 TAF9P2-201ENST00000454958 515 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AL096803.1-201ENST00000456921 1021 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AKR1D1P1-201ENST00000457236 936 ntBASIC7.71□□□□□ -1.18
SOX1O00570 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 RN7SKP196-201ENST00000516267 345 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RNU6-1178P-201ENST00000516674 107 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 AC016144.1-201ENST00000548175 1087 ntBASIC7.71□□□□□ -1.18
SOX1O00570 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.71□□□□□ -1.18
SOX1O00570 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 AC023813.2-201ENST00000564321 469 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AL078601.3-201ENST00000573303 535 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC022069.1-201ENST00000582910 658 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.71□□□□□ -1.18
SOX1O00570 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.71□□□□□ -1.18
SOX1O00570 AL451085.1-201ENST00000604546 690 ntBASIC7.71□□□□□ -1.18
SOX1O00570 RN7SL715P-201ENST00000606972 286 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC109347.2-201ENST00000610220 349 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC087241.4-201ENST00000612441 480 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC121761.2-201ENST00000617300 689 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AL035661.1-201ENST00000620459 1144 ntBASIC7.71□□□□□ -1.18
SOX1O00570 AC012513.3-201ENST00000623250 2116 ntBASIC7.71□□□□□ -1.18
SOX1O00570 LINC01613-201ENST00000561476 2780 ntBASIC7.71□□□□□ -1.18
SOX1O00570 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.71□□□□□ -1.18
SOX1O00570 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC7.71□□□□□ -1.18
SOX1O00570 TMCC1P1-201ENST00000518897 1980 ntBASIC7.71□□□□□ -1.18
SOX1O00570 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC7.71□□□□□ -1.18
SOX1O00570 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SOX1O00570 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC7.71□□□□□ -1.18
SOX1O00570 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 FO082842.1-201ENST00000423552 1370 ntBASIC7.71□□□□□ -1.18
SOX1O00570 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
SOX1O00570 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC7.7□□□□□ -1.18
SOX1O00570 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SOX1O00570 COX6A1P3-201ENST00000404167 293 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 AL158825.1-201ENST00000414735 521 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL160175.1-201ENST00000428124 247 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.7□□□□□ -1.18
SOX1O00570 AC005040.1-201ENST00000437783 482 ntBASIC7.7□□□□□ -1.18
SOX1O00570 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.7□□□□□ -1.18
SOX1O00570 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.7□□□□□ -1.18
SOX1O00570 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.7□□□□□ -1.18
SOX1O00570 AC093899.1-201ENST00000457984 376 ntBASIC7.7□□□□□ -1.18
SOX1O00570 H3F3AP5-201ENST00000475267 429 ntBASIC7.7□□□□□ -1.18
SOX1O00570 RPS4XP6-201ENST00000477670 797 ntBASIC7.7□□□□□ -1.18
SOX1O00570 PPP1R2P6-201ENST00000478565 588 ntBASIC7.7□□□□□ -1.18
SOX1O00570 AC131233.1-201ENST00000479200 955 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms