Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 IGLV3-4-201ENST00000432300 244 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AL590004.3-202ENST00000445883 451 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 UBE2V2P4-201ENST00000447495 259 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MGAT2P1-201ENST00000449718 797 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AL008723.3-201ENST00000608926 449 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MIR7159-201ENST00000620587 66 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 AL591848.4-201ENST00000567832 3472 ntBASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCF1Q9UBD9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC093829.1-201ENST00000506662 1618 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 RNA5SP350-201ENST00000363298 111 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 RN7SKP121-201ENST00000410842 305 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC010240.2-201ENST00000445363 1205 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 RPL5P12-201ENST00000477071 851 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 NPM1P27-201ENST00000502784 830 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 MIR1910-201ENST00000636955 80 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AL596275.2-208ENST00000641192 594 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 AC104966.1-201ENST00000467010 1464 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 CYP2G2P-201ENST00000594920 1485 ntBASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCF1Q9UBD9 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 RNA5SP433-201ENST00000364491 114 ntBASIC5.62□□□□□ -1.51
CLCF1Q9UBD9 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms