Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 IGKV3-34-201ENST00000521692 293 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 OR9G2P-201ENST00000533326 880 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 HIGD1AP17-201ENST00000554576 276 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 SOD1P2-201ENST00000563903 451 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 APOC2-202ENST00000585786 880 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC008752.3-201ENST00000588113 712 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 ZSCAN26-203ENST00000611552 1030 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 RN7SL113P-201ENST00000619959 299 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 PCMTD1P7-201ENST00000634506 357 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 XRCC6P5-201ENST00000435236 1795 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 AP000641.1-201ENST00000531988 1639 ntBASIC7.89□□□□□ -1.15
CUEDC1Q9NWM3 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AC125238.2-201ENST00000430003 1440 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AC078795.1-201ENST00000602342 3143 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL512310.3-201ENST00000547023 1335 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 OR11H13P-201ENST00000359695 979 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RNA5SP426-201ENST00000362901 121 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RNU4-59P-201ENST00000364447 116 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RNA5SP427-201ENST00000365323 119 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AC093392.1-201ENST00000366280 340 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RNU6-1227P-201ENST00000383981 107 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 Y_RNA.548-201ENST00000384656 105 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RNU6-876P-201ENST00000391295 104 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 FAT1P1-201ENST00000406588 507 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AC002524.1-201ENST00000411687 547 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 CEACAMP8-201ENST00000413902 580 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AC008155.1-201ENST00000421078 329 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL049758.1-201ENST00000423154 397 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL513174.1-201ENST00000423182 629 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 RANP5-201ENST00000427731 655 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 BX005266.3-201ENST00000443013 1075 ntBASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.88□□□□□ -1.15
CUEDC1Q9NWM3 ATP5G1P6-201ENST00000451206 412 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms