Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.6□□□□□ -1.35
GFRA1P56159 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
GFRA1P56159 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC010886.1-201ENST00000437380 2869 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
GFRA1P56159 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GFRA1P56159 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 RNU4-81P-201ENST00000363561 144 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 SNORD116.1-201ENST00000365628 92 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 RNU4-31P-201ENST00000384211 141 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 SNORA70.8-201ENST00000384231 136 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 RNU6-549P-201ENST00000384433 107 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
GFRA1P56159 RPL5P8-201ENST00000396820 815 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AL078595.1-201ENST00000404458 226 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 SOD1P1-201ENST00000407803 440 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 RNA5SP231-201ENST00000410496 138 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 IGKV1OR2-3-201ENST00000411475 288 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 OR4K6P-201ENST00000416478 897 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 MOB1AP1-201ENST00000430903 535 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 LSM3P3-201ENST00000436601 306 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC092170.1-201ENST00000440211 356 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC093799.1-201ENST00000452411 499 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC096922.1-201ENST00000461635 651 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC108734.3-201ENST00000481241 1165 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC079594.1-201ENST00000489757 331 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 MTCO3P15-201ENST00000526563 574 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC6.59□□□□□ -1.35
GFRA1P56159 RBM22P12-201ENST00000567098 1255 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC002400.1-201ENST00000569310 726 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC6.59□□□□□ -1.35
GFRA1P56159 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 AC023206.1-201ENST00000605824 298 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AL583856.2-201ENST00000606298 543 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.59□□□□□ -1.35
GFRA1P56159 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 AC139769.3-201ENST00000618383 175 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AL157770.1-201ENST00000623049 439 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC098679.5-201ENST00000624394 571 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 AC009948.5-201ENST00000624360 4406 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 AL359922.2-201ENST00000581788 3017 ntBASIC6.59□□□□□ -1.35
GFRA1P56159 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
GFRA1P56159 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
GFRA1P56159 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.59□□□□□ -1.36
GFRA1P56159 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
GFRA1P56159 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
GFRA1P56159 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
GFRA1P56159 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.59□□□□□ -1.36
GFRA1P56159 AL049737.1-201ENST00000413920 1403 ntBASIC6.59□□□□□ -1.36
GFRA1P56159 AC061975.5-201ENST00000584928 1441 ntBASIC6.59□□□□□ -1.36
GFRA1P56159 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC6.58□□□□□ -1.36
GFRA1P56159 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms