Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RNF144AP50876 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF144AP50876 PCMTD1P2-201ENST00000565017 355 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 RPS3AP23-202ENST00000574601 686 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF144AP50876 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF144AP50876 AC060766.2-201ENST00000588235 334 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF144AP50876 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF144AP50876 AF146191.1-201ENST00000604941 889 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF144AP50876 RNF219-AS1-213ENST00000607860 577 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF144AP50876 AC068726.1-201ENST00000610993 341 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AC005962.2-201ENST00000611427 652 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
RNF144AP50876 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RNF144AP50876 AC239859.6-201ENST00000622095 213 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AL359922.3-201ENST00000624779 1670 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 AC120349.2-201ENST00000625002 298 ntBASIC7.65□□□□□ -1.18
RNF144AP50876 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF144AP50876 OR4P4-202ENST00000641760 2086 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RNF144AP50876 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC7.65□□□□□ -1.19
RNF144AP50876 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
RNF144AP50876 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.65□□□□□ -1.19
RNF144AP50876 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF144AP50876 AC087501.5-201ENST00000607496 2374 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 CCDC162P-202ENST00000368966 6751 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC010680.2-201ENST00000603521 2117 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF144AP50876 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF144AP50876 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF144AP50876 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 AL138807.1-201ENST00000400354 459 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC007390.1-201ENST00000415722 356 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RPL7AP72-201ENST00000417266 768 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 NANOGP4-201ENST00000427230 913 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC242426.1-201ENST00000435270 960 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AL731567.1-201ENST00000435635 462 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC002542.1-201ENST00000440683 193 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AL035417.1-201ENST00000442754 214 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 HMGB1P5-202ENST00000451497 985 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RPSAP54-201ENST00000454001 886 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 SNORD42A-201ENST00000459584 64 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RPS27P12-201ENST00000464146 258 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RN7SL841P-201ENST00000470547 297 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RN7SL630P-201ENST00000483714 297 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 RN7SL215P-201ENST00000487718 298 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF144AP50876 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF144AP50876 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC087639.1-201ENST00000560974 920 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF144AP50876 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.64□□□□□ -1.19
RNF144AP50876 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 AC009686.2-201ENST00000607017 577 ntBASIC7.64□□□□□ -1.19
RNF144AP50876 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF144AP50876 AL592295.2-201ENST00000612578 206 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms