Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 AL021877.2-201ENST00000624442 10684 ntBASIC8.07□□□□□ -1.12
LIG1P18858 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 AL596244.1-201ENST00000567068 3779 ntBASIC8.07□□□□□ -1.12
LIG1P18858 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LIG1P18858 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 AC005034.3-201ENST00000604845 1747 ntBASIC8.06□□□□□ -1.12
LIG1P18858 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC8.06□□□□□ -1.12
LIG1P18858 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 DDX10P2-201ENST00000417796 2614 ntBASIC8.06□□□□□ -1.12
LIG1P18858 OGFOD1P1-201ENST00000447552 1592 ntBASIC8.06□□□□□ -1.12
LIG1P18858 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 AC125232.1-201ENST00000452554 1408 ntBASIC8.06□□□□□ -1.12
LIG1P18858 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LIG1P18858 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 AL138880.1-201ENST00000405824 642 ntBASIC8.06□□□□□ -1.12
LIG1P18858 HMGB1P13-201ENST00000406019 642 ntBASIC8.06□□□□□ -1.12
LIG1P18858 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 RPL5P2-201ENST00000429598 854 ntBASIC8.06□□□□□ -1.12
LIG1P18858 MYO5BP3-201ENST00000431872 1279 ntBASIC8.06□□□□□ -1.12
LIG1P18858 OR2L9P-201ENST00000444456 913 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LIG1P18858 ELOCP30-201ENST00000447108 299 ntBASIC8.06□□□□□ -1.12
LIG1P18858 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC090589.1-201ENST00000473109 362 ntBASIC8.06□□□□□ -1.12
LIG1P18858 RPL23AP8-201ENST00000479812 475 ntBASIC8.06□□□□□ -1.12
LIG1P18858 ANK3-213ENST00000486349 493 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 RN7SL205P-201ENST00000490174 284 ntBASIC8.06□□□□□ -1.12
LIG1P18858 HMGB1P38-201ENST00000490557 577 ntBASIC8.06□□□□□ -1.12
LIG1P18858 OR2A20P-203ENST00000498397 1268 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 RNA5SP116-201ENST00000516132 98 ntBASIC8.06□□□□□ -1.12
LIG1P18858 SNORA19.3-201ENST00000516165 130 ntBASIC8.06□□□□□ -1.12
LIG1P18858 IGKV1D-32-201ENST00000517449 318 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC091163.3-201ENST00000518269 1144 ntBASIC8.06□□□□□ -1.12
LIG1P18858 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC027369.2-201ENST00000528030 440 ntBASIC8.06□□□□□ -1.12
LIG1P18858 OR5M4P-201ENST00000529436 925 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC068790.1-201ENST00000536166 355 ntBASIC8.06□□□□□ -1.12
LIG1P18858 NF1P12-201ENST00000549593 583 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC8.06□□□□□ -1.12
LIG1P18858 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 AL023806.2-201ENST00000603042 263 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AL139344.1-201ENST00000605228 195 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AL158042.1-201ENST00000605338 460 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC012213.4-201ENST00000606457 354 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC004775.1-201ENST00000607389 753 ntBASIC8.06□□□□□ -1.12
LIG1P18858 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AC025016.1-201ENST00000616746 682 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AL645927.2-201ENST00000618350 349 ntBASIC8.06□□□□□ -1.12
LIG1P18858 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 AL596275.2-208ENST00000641192 594 ntBASIC8.06□□□□□ -1.12
LIG1P18858 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LIG1P18858 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.06□□□□□ -1.12
LIG1P18858 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LIG1P18858 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.05□□□□□ -1.12
LIG1P18858 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.05□□□□□ -1.12
LIG1P18858 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 AC008957.3-201ENST00000624112 2242 ntBASIC8.05□□□□□ -1.12
LIG1P18858 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
LIG1P18858 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LIG1P18858 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms