Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GAPDHP58-201ENST00000438477 1006 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC002486.2-201ENST00000447806 590 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 RN7SL643P-201ENST00000471845 291 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 RPS14P8-201ENST00000478778 369 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 KHDC1P1-201ENST00000511053 508 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC130365.2-201ENST00000525882 1201 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC079600.1-201ENST00000550326 297 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC022404.1-201ENST00000555320 273 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC044860.2-201ENST00000561005 179 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.48□□□□□ -1.37
PDGFBP01127 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.48□□□□□ -1.37
PDGFBP01127 AC139795.3-201ENST00000606358 541 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AC026951.2-201ENST00000613847 241 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 AF117829.2-201ENST00000619538 361 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.48□□□□□ -1.37
PDGFBP01127 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 AC068733.2-201ENST00000605434 1418 ntBASIC6.48□□□□□ -1.37
PDGFBP01127 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PDGFBP01127 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PDGFBP01127 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PDGFBP01127 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 RNU1-134P-201ENST00000362935 165 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 RNU1-19P-201ENST00000363306 165 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 RN7SKP160-201ENST00000363804 340 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 AL355375.1-201ENST00000405686 392 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 SPTLC1P2-201ENST00000407089 121 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 MIR1203-201ENST00000408812 85 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFBP01127 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 PTMAP6-201ENST00000439110 327 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFBP01127 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFBP01127 GLRXP3-201ENST00000470810 321 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 RPS23P1-201ENST00000491662 432 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFBP01127 RNA5SP34-201ENST00000516887 130 ntBASIC6.47□□□□□ -1.37
PDGFBP01127 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.47□□□□□ -1.37
PDGFBP01127 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFBP01127 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.47□□□□□ -1.37
PDGFBP01127 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PDGFBP01127 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.47□□□□□ -1.37
PDGFBP01127 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.47□□□□□ -1.37
PDGFBP01127 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.46□□□□□ -1.37
PDGFBP01127 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.46□□□□□ -1.37
PDGFBP01127 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.46□□□□□ -1.37
PDGFBP01127 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFBP01127 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
PDGFBP01127 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.46□□□□□ -1.37
PDGFBP01127 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFBP01127 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFBP01127 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFBP01127 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
PDGFBP01127 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms