Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.95□□□□□ -1.46
NKX2-2O95096 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AL589743.6-201ENST00000611025 117 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 AL445649.1-201ENST00000615941 691 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 AL596275.2-208ENST00000641192 594 ntBASIC5.95□□□□□ -1.46
NKX2-2O95096 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.95□□□□□ -1.46
NKX2-2O95096 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NKX2-2O95096 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NKX2-2O95096 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC005261.6-201ENST00000623072 1387 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NKX2-2O95096 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 USP9YP19-201ENST00000412165 485 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 GABARAPL3-201ENST00000412799 354 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC098592.2-201ENST00000413158 265 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AL157884.1-201ENST00000424561 454 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AL590623.1-201ENST00000427864 105 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 MTATP6P11-201ENST00000428071 670 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC128677.1-201ENST00000436016 442 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC009237.1-201ENST00000442127 744 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC005000.1-201ENST00000536192 288 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 TPRX1P1-201ENST00000557620 319 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC073046.2-201ENST00000604756 527 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AL390877.1-201ENST00000605704 214 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC015802.5-201ENST00000607478 399 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC068726.1-201ENST00000610993 341 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC024255.1-201ENST00000614376 102 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC026367.3-201ENST00000619032 590 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC091948.2-201ENST00000636510 279 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NKX2-2O95096 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 CR382285.2-201ENST00000624662 1495 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 AC090220.1-201ENST00000593078 1699 ntBASIC5.94□□□□□ -1.46
NKX2-2O95096 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.94□□□□□ -1.46
NKX2-2O95096 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NKX2-2O95096 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX2-2O95096 AC119674.1-213ENST00000641177 1386 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX2-2O95096 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 ICE2P1-201ENST00000512800 1849 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 MAPK10-287ENST00000641217 3037 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NKX2-2O95096 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NKX2-2O95096 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX2-2O95096 VN1R31P-201ENST00000417498 730 ntBASIC5.93□□□□□ -1.46
NKX2-2O95096 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms